Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01383 ATGGCACATGTGAGGCAAATCAAATATCTCCTCTCATACCGTTACACGACAAAATCCCAACTCCCAAATAGAAACAATGTTGTGGCCGGCTACTTCACATGCTATCAAAATCCAAAACAAAAGCAGTGTGCTCCAACCATTTACAGggactcaaatttgaagatcaaaacaactcctccaaaatctttaagaCGGGCCTACTTTGTAGCTCTATCTATGATGCAATTCACAACTTCAGTACCTTATTTGCACCAAACAAAAACACATTTTTCAAATTCAAACCCTTCTTCCATGAACAAAAACAATCAAATACCAAATAGGAATACAAACATTAAACCATGGTTCCCAACATCAAAAGCTTTAACCAACTTTGGTGACACAAATTGCATGGAACAATTACTTGTTCATTGCGCCGACGCAATCGAAACCAATGATGTAACACTTGCTCAACAAATCCTTTGGGTTCTCAACAACATAGCACCACCAGATGGCGATTCAAATCAACGCTTAGCTAATAGTTTCCTAAGAGCTCTCACAAATCGTGCGGCGAAAAATGGAACTTGCAAAATGCTAGTAGAAGTTTCGAACGCTCGTAACAATCTCAACATTGAAACACATAGATTCTCAATCATTGAACTAGCTAACTTTGTCGATTTAACGCCTTGGCATCGATTTGGTTTCACCGCGGCTAATGCATCCATTATTGAAGCAACAGAAGGTTTCTCAGTGATTCATATTGTGGATTTGAGTTCAACTCATTGCATGCAGATTCCTACATTAATCGATGCCATTGCTAGTCGCCACGAAGTTTCTCCGTTGATCAAACTCACCGTAGCTGATCATGCTAACATTGATCAAATTCCATTTCATGTTCCACCTATGCTTGATCTTTCTTATGAAGAGTTAGGTTCGAAGTTGGTGAATTTCGCTAGGTCAAGAAATGTAACATTGGAATTCAGAGTTGTTTCTTCAAGTTACACAAATGGTTTTGCTTCTTTGATTGAACATTTGAGAGTGCAACGTTTGGTTTATTCAGGTGAAGCTTTGGTTATAAACTGTCACATGATGCTTCATTATATTCCAGATGAAACCCTATCTTTAATTCATGACACAAATTTAAATTCAAACTCAAATTCTTATGTTTATGATActttttcttcttgttcgtcttctgctgctgttactgttactactactgctactactacttcttTGAGATCGTTGTTTCTTAAGGCGGTTCGAGGTTTAGATCCAACACTTGTAGTTTTAGTAGATGAAGATGTTGATTTAACTTCAAATAACTTGGTTTGTAGATTAAGGTCTGCATTTAATTATCTATGGATACCTTATGATACTGTGGACACATTTCTGCCACGTGGAAGTAAACAAAGGCAATGGTATGAAGCAAACATTTGTTGGAAGATTGAGAATGTGATTGCTCATGAAGGGGTTCAAAGAGTTGAgagagatgagaatatagggaaatgggaacaaagaatgagaaatgCAAATTTTCAAGGGATTGGATTTGGTGAGGAATGTGTTGGTGAGGTGAAGGCTATGCTTGATGAACATGCTGCTGGTTGGGGATTGAAGAAGGAAGATGAACATATTGTGCTTACTTGGAAAGGACATAATGTTGTTTTTGCATCTGCTTGGTTACCTGCTTAG 1671 0.3447 MAHVRQIKYLLSYRYTTKSQLPNRNNVVAGYFTCYQNPKQKQCAPTIYRDSNLKIKTTPPKSLRRAYFVALSMMQFTTSVPYLHQTKTHFSNSNPSSMNKNNQIPNRNTNIKPWFPTSKALTNFGDTNCMEQLLVHCADAIETNDVTLAQQILWVLNNIAPPDGDSNQRLANSFLRALTNRAAKNGTCKMLVEVSNARNNLNIETHRFSIIELANFVDLTPWHRFGFTAANASIIEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVSPLIKLTVADHANIDQIPFHVPPMLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSLIHDTNLNSNSNSYVYDTFSSCSSSAAVTVTTTATTTSLRSLFLKAVRGLDPTLVVLVDEDVDLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEANICWKIENVIAHEGVQRVERDENIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01383 556 ProSiteProfiles GRAS family profile. 121 554 IPR005202 -
Car07g01383 556 Pfam GRAS domain family 131 553 IPR005202 -
Car07g01383 556 MobiDBLite consensus disorder prediction 89 109 - -
Car07g01383 556 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 102 554 IPR005202 -
Car07g01383 556 PANTHER SCARECROW-LIKE PROTEIN 32 102 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01383 Car-Chr7 12952684 12955370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01383 115 555 GRAS Transcription Factor Family AT3G49950 55.281 1.13e-171 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car07g01383 GRAS 4.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01383 - - cam:101509453 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01383 07 12952684 12955370 Car07g01383 07 12952684 12955370 ECH