Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01382 ATGAGTTGCAACGGTTGCAGAGTTCTTCGAAAGGGTTGCAGTGACTCATGTATTTTGCGACCTTGTTTACAATGGATCGAAACCCCTGAAGCTCAAGGCCACGCCACTGTTTTCGTAGCCAAATTCTTTGGTCGCGCTGGTCTCATGTCTTTCATTTCCAACGTCCCTGAAACTCAAAGACCAGCTCTCTTTCAGTCTCTACTGTTTGAAGCGTGCGGAAGAACGGTTAACCCTGTTAACGGTGCCGTCGGACTTCTCTGGACTGGAAACTGGCACGTGTGCCAGGCAGCGGTCGAGACGGTTCTTCGAGGCGGCATGCTTAGGTCGTTACCGGAGCTTACTACTCTGGACGCGCCTCCTGTCGCCGCTGACGAGGCATCGGAGGCGGAAGATGCCGGCACGGATGTTATTTTGAGGATTCGAGATCCGAATCAGAATTTCCGGCTAGCGAACTCGCGATCTAATAATAAGGTTTATGCCGGTGGAAAACGCCGGCGATCGGAGGAGGGTGTGAATATTCCGGCGGCGATTAATCTTGATCTCCGGTTGACGCCGATTTTCCTGCAGAAAGCGTCGGAGAATCGTCGGCCTGGATCGCCGTCGATGACGTCGGAAGAATCGGTGACGACGACGGTGTGTTTGGAGGCTGGGATCGGAGATCCATGGACTCACGGCGGTGATCGGAAAGTTCTCAACCTTTTCATATGA 708 0.5311 MSCNGCRVLRKGCSDSCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISNVPETQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGMLRSLPELTTLDAPPVAADEASEAEDAGTDVILRIRDPNQNFRLANSRSNNKVYAGGKRRRSEEGVNIPAAINLDLRLTPIFLQKASENRRPGSPSMTSEESVTTTVCLEAGIGDPWTHGGDRKVLNLFI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01382 235 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 235 - -
Car07g01382 235 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 235 - -
Car07g01382 235 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Car07g01382 235 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01382 Car-Chr7 12923879 12925328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01382 1 235 AS2 family AT4G37540 55.823 3.23e-83 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car07g01382 LOB 7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01382 - - gmx:100802764 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01382 07 12923879 12925328 Car08g00441 08 3678559 3680051 ECH
Car07g01382 07 12923879 12925328 Car07g01382 07 12923879 12925328 ECH
Car07g01382 07 12923879 12925328 Car08g00441 08 3678559 3680051 PCT