Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01378 ATGAAAGCTTATCATCATATTCATTTAAATTTGAGTTTCTTTTTATTCATATCATTATTCTCCCTAACAACACTAACCCCACTCCCCACGATTCAGTTTCATACCCCCAACAGAAGGCTCCTACACCAACCGTTATTTCCGGTCAGTTCTGCTCCGCCACCATTGTTCTCTCCGCCGCCTCCAGATATCACCACCCCTCCCTCTCCCGACATTCCATTTTTCAATGAGCTCCCAACAGGACCGCCGCCTCCGGAGGTTAACAACCAGAATCTACCGTCTCCGTCAACTTTCAACGCCACAATTGCAAATCCAACGGCTACGAAGCCTACAAAACCTGCTAAGAAGGTTGCAATTGCGGTTTCTGTGGCATTTTCGATATTTGTGATGTTTTCCGCAGTCGCATTCTTCTTGTACAAGCACAGAACGAAATATCCCTCGGAATCAGAGAAACGGAAGCTTGTTGGTGAGAATTCTCCTAGAGTTCTAGAAGATTCCACGAGGACTCTACCACCTTCAAGTTTCCTCTACATTGGAACTGTGGTGGAGTCCAACGGAACGTCGGTGCCGGTAGGTGAGAGTGACCGTAACCACTCACCTTATCACATTCAGAAACTCAATCCTATCGATAATCGTTACCGGCCAAGTCCTGAGTTGCATCCATTACCGCCGCTTACTAAGTCTATAGTCGAACCTAACTCGCCACCGGCGGCTTCTTCTTCGTCGTCGTCGGACAACGAGGAAAGTCGCGAGACAGCGTTTCACTCTCCACCGGCATCTTCAATAAGCCATGAAGACAGTTATTACACGCCGGTTTCGCGTCAGAGTTATCTTACAAACGGAAGCCCCGCCGCGCCGGTTGCTGTTACTCCGGTGGTTCCTTATTCAAAGAGAACTTCGCCGAAATCTCGATTTTCTGCTTCTTCGCCGGATATGAAACACGTGATGATACCTTCGATAAAGCACGTGGAGAATGAATCGACGTTAGGTCCTTCTAGAAGGCCAAAATTCTCATCGCCTCCACCAGCGCCGAATTTGACGCATCTTCATTCAAACGACTCTCGGGATTCACTTAAACTtcctcctcctgttccaccgccgccacctcctccgccAAAAAATGGTTGGTCTCCTGCAGTTAGTGTATCTGTATCCCCTTCCACTGCTTCCAGAAAATATCAACGGTCTCAATCTCCAACAATTCAGGGAAAGGATTATGCATCTGGTAACAGTGCGAGTGTGAAGAAAGGTTTAGAGGAAGAAGATGATGAAATGGATGAAGGAAATGGAAAACCTAAGTTGAAAGCTTTGCATTGGGATAAAGTGCGTGCTACCTCAGATCGTGCTACTGTGTGGGACCAATTAAAATCAAGCTCCTTTCAGTTAAATGAGGACATGATGGAGTCCCTGTTTGGTTGTAATTCAATGAATTCTGTCCCTAAACCTAAAGAGACAAATGTTACCAGGAAATCAGTTTTTCAGACAGTTGAACAAGAGAATAGGGTGTTAGACCCTAAGAAATCccaaaacatagctatactactcagggcattgaacgtcacaagagatgaggtgtctgaagctcttttagatgGGAACCCTGAAGGTTTGGGTGCTGAGTTATTTGAAACTCTAGTGAAGATGGCTCCAACAAAAGAGGAGGAGATAAAACTAAAAAATTATGATGGTGACCTTTCAAAACTTGGACCTGCAGAAAGATTTCTTAAAGCAGTACTTGATATCCCTTTAGCTTTTAAAAGAGTTGAAGCCATGCTGTACAGAGCTAATTTTGAAACAGAAGTTAACTACCTTAAGAAATCCTTTCAAACCCTAGAGGCAGCAAGTGAGGAATTGAAGAGCAGTCGGTTATTCCTCAAACTCCTAGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGCACCAATCGCGGCGATGCCAAATCTTTCAAACTCGACACACTCCTGAAACTTGTAGATATAAAAGGAACAGATGGAAAGACCACACTGCTCCATTTTGTTGTTCAAGAGATTATTAGGTCTGAAGGTACAGGTAGTCAATCTGCAAATGAGGATGTTCAAAACCAAACGAATTCCCAGTTCAATGAGGATGAATTCAGAAAGAAAGGATTACAGGTTGTGGCTGGACTGAGTAGAGACTTTGGTAATGTAAAAAAGGCGGCAGGAATGGACTCAGATGTCCTAAGTGGCTACGTCGTAAAGCTTGAAATGGGTCTTGATAAAGTGAGATTGGTTTTGCAATATGTAAAACCAGATATGCAAGGAAACTTCTTTAACTCAACAGAGATATTTCTAAAAGATGCCCAAGAGAAAATTATAGGGATCAAGGCTGATGAAATAAGGGCCTTGTTCCTTGTGAGAGAAGTTACAGAATACTTTCATGGGGATACAGCAAAAGAAGAAGCTCACCCTTTCAGAATTTTCATGATTGTAAGAGATTTCCTAAATGTTTTAGATCAAGTCTGCAAAGAAGTGGGAAGAATGCAGGATAGAACCATGATCGGTTCATCGAGATCCTTCAGGATAGCTGCGAGTGCATCATTACCTGTTCTCAACAGGTACCACCATGCAAGACAAGATACAAGTTCAGATGAGGAAAGCTTATCACCCTAA 2631 0.4158 MKAYHHIHLNLSFFLFISLFSLTTLTPLPTIQFHTPNRRLLHQPLFPVSSAPPPLFSPPPPDITTPPSPDIPFFNELPTGPPPPEVNNQNLPSPSTFNATIANPTATKPTKPAKKVAIAVSVAFSIFVMFSAVAFFLYKHRTKYPSESEKRKLVGENSPRVLEDSTRTLPPSSFLYIGTVVESNGTSVPVGESDRNHSPYHIQKLNPIDNRYRPSPELHPLPPLTKSIVEPNSPPAASSSSSSDNEESRETAFHSPPASSISHEDSYYTPVSRQSYLTNGSPAAPVAVTPVVPYSKRTSPKSRFSASSPDMKHVMIPSIKHVENESTLGPSRRPKFSSPPPAPNLTHLHSNDSRDSLKLPPPVPPPPPPPPKNGWSPAVSVSVSPSTASRKYQRSQSPTIQGKDYASGNSASVKKGLEEEDDEMDEGNGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCNSMNSVPKPKETNVTRKSVFQTVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELFETLVKMAPTKEEEIKLKNYDGDLSKLGPAERFLKAVLDIPLAFKRVEAMLYRANFETEVNYLKKSFQTLEAASEELKSSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGSQSANEDVQNQTNSQFNEDEFRKKGLQVVAGLSRDFGNVKKAAGMDSDVLSGYVVKLEMGLDKVRLVLQYVKPDMQGNFFNSTEIFLKDAQEKIIGIKADEIRALFLVREVTEYFHGDTAKEEAHPFRIFMIVRDFLNVLDQVCKEVGRMQDRTMIGSSRSFRIAASASLPVLNRYHHARQDTSSDEESLSP 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01378 876 MobiDBLite consensus disorder prediction 377 408 - -
Car07g01378 876 Gene3D Formin, FH2 domain 432 847 IPR042201 -
Car07g01378 876 MobiDBLite consensus disorder prediction 231 267 - -
Car07g01378 876 PANTHER FORMIN-RELATED 11 876 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car07g01378 876 SMART it6_source 423 839 IPR015425 -
Car07g01378 876 MobiDBLite consensus disorder prediction 146 167 - -
Car07g01378 876 PANTHER FORMIN-LIKE PROTEIN 11 876 - -
Car07g01378 876 SUPERFAMILY Formin homology 2 domain (FH2 domain) 360 836 - -
Car07g01378 876 Pfam Formin Homology 2 Domain 427 824 IPR015425 -
Car07g01378 876 MobiDBLite consensus disorder prediction 358 375 - -
Car07g01378 876 ProSiteProfiles Formin homology-2 (FH2) domain profile. 423 850 IPR015425 -
Car07g01378 876 MobiDBLite consensus disorder prediction 294 432 - -
Car07g01378 876 MobiDBLite consensus disorder prediction 186 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01378 Car-Chr7 12849960 12854735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01378 412 866 FH2 protein (formin) Gene Family AT5G67470 71.179 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01378 - - gmx:100803578 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01378 07 12849960 12854735 Car07g01378 07 12849960 12854735 ECH
Car08g00435 08 3601860 3606811 Car07g01378 07 12849960 12854735 PCT