Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01377 ATGGACAACATCAATGACAATTCATTGAACCAACAACATCTAAATTCCAATGTTGAAAACATTGAGTATTTGTTTACACGTGAAACAGAGTTCCATTCCTTCAATTATTGCTCCAAATCCACCACATGCCATGTCCACTTCAACCACACACGTATTAATGCCATTGACACCATTTTCAAAACACGTGAAAAACTTGGATTCAAGCTCTCTACAGCTTATTTGTCAGTGACATACTTCGATCAGTTTCTTGTGAAGCAATCCATCCATGAAGACAGACCTATTCAAGAATTCTACGTGGCGTGCATGTCTCTCGCAGCGAAAATGATGGAAGAACGTGATCTGCAGCTTCTATTCAAATACACAACAGAAACAGACGAAGAGCAAGGTTTTGCTGATAAGAAATCTATTTGGGAGATGGAGGTAGAGGTTTTAAGTTCATTGGAATGGGAATTGACAACTGTGACTCCTTTTGATTTTCTGCATTACTTTGTTTACTTGTTCTGCCCTGAATCCCTGCCAGATCCATTAATCTCACAAGCTGTCCAACATATTGTGGACATCCTGAAAGATGTAAATTTGATGGATCATAGGCCATCCGCTATTGCCTTGGCTGCCATATTGACGGTGGCTTTTGATGGTACATTAACAAGAGAGATCATAGATCTGCAGATAGCTGAAATCTCACAGCAGCTAAATTTAGATATTGAAGGCGTTTTTTCCTGTTACTGTCTAATGCAGGAAAAAAGTACAGAGAAGGGAAAGTTAAACACCCCTGCCACAACTTTGACTGCCCAATGGAGCTACACATCTGTTCTTGACCATTCCTCTGTTACTTCTTCAAAAGCTAAAAGAAAACTTTGTTATGACAACAAAGAAAATTGCCCTAGGAAAATATCACATCGGCGTTAG 909 0.3938 MDNINDNSLNQQHLNSNVENIEYLFTRETEFHSFNYCSKSTTCHVHFNHTRINAIDTIFKTREKLGFKLSTAYLSVTYFDQFLVKQSIHEDRPIQEFYVACMSLAAKMMEERDLQLLFKYTTETDEEQGFADKKSIWEMEVEVLSSLEWELTTVTPFDFLHYFVYLFCPESLPDPLISQAVQHIVDILKDVNLMDHRPSAIALAAILTVAFDGTLTREIIDLQIAEISQQLNLDIEGVFSCYCLMQEKSTEKGKLNTPATTLTAQWSYTSVLDHSSVTSSKAKRKLCYDNKENCPRKISHRR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01377 302 PANTHER AMINO-TERMINAL DOMAIN CYCLIN 15 251 - -
Car07g01377 302 Gene3D - 25 146 - -
Car07g01377 302 Pfam Cyclin, N-terminal domain 22 151 IPR006671 -
Car07g01377 302 Gene3D - 147 274 - -
Car07g01377 302 PANTHER CYCLINS 15 251 IPR039361 -
Car07g01377 302 Pfam Cyclin, C-terminal domain 154 255 IPR004367 -
Car07g01377 302 SUPERFAMILY Cyclin-like 19 151 IPR036915 -
Car07g01377 302 CDD CYCLIN 50 125 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01377 Car-Chr7 12846341 12848623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01377 50 258 Core Cell Cycle Gene Families AT1G70210 34.906 9.88e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01377 K18811 - gmx:100808000 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01377 07 12846341 12848623 Car07g01377 07 12846341 12848623 ECH
Car07g01377 07 12846341 12848623 Car08g00432 08 3575230 3577081 ECH