Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01373 ATGGATACATTGTTTAGGCTAGTCAATTTtcaacaacaccatcatcatcatcatcatcaacccgatccttccctcaactccaccaccaccTTAACAACATCAAGCAGCTCTAGATCCTcaacacaaacaccaccaacaacaacgtatcattattatcaacaacaacaacaacaagaaGACGAAGAATGCTTCAATTATTATTACATGGATAACAATAATAATGATGAAGATTTATCCTCATCTTCTTCTAAACAACAATACTACTATCCTTATCAACCTCAACACCATGTATCCACTATCACAACTCCAAACACCACCTTTAATAATACTATTAACACCCCCACCACCACCGATAATTACTCTTTCTCACCTCCCCAAGACTACTTCAACTTTGAAATACTCTCCGGCAACTCATGGGCACCAAACATCCTCCTCGAAACCGCACGTGCGATTTCTGACAACAACAACACAAATCGAATCCAACAACTCATGTGGATGTTAAACGAACTTAGTTCCCCTTACGGTGACACAGATCAAAAAATAGCATCATATTTTCTTCAAGCTTTATTTAGTCGCATAAATGATGCAGGTGATAGAACCTACAAAACCTTATCTTTTGCTTCGGACAAAATATGTTCATTCGATTCAACGAGGAAGATGTTGTTGAAGTTCCAAGAAGTTAGTCCATGGACAACGTTTGGACACGTGGCATGCAACGGTGCTATCTTAGAAGCACTAGAAGGCGCCGGAAACCACCGTGACGCTTTGATATCTTTGTTACGTGGGTTGGAGCCTAGGGTTATGACGGTGGTTGAAGAGGAAGCTGATTTGGAATATTGTTTTAGTTCGGAATTTGTGGAAGGTTTTGGAGAGTGTTTGAGATGGTTTAGGGTTTATTTTGAAGCACTTGAGGAGAGTTTTTCGAGAACGAGCGGAGAGAAGTTGATATTGGAAAGAGAAGCTGGAAGAGCGATTGTTGATTTGATTTCTTGTGATCCTTATGAGTCGGTGGAGAGGCGGGAAATGGCGTCGAGGTGGAGGAGGCGTTTGCATGGTGGAGGGTTGAATACGGTGTCGTTTAGTGAAGAGATTTGTGATGATGTTAGGGCTTTGTTGAGGAGGTATAGGGAAGGGTGGTCAATGACACAGTGCTCCTCCGATGATAATAGTAACGGAATATTCTTGTTGTGGAAGGATCAGCCGGTTGTGTGGGCCAGTGTATGGAGGCCTTGA 1233 0.3804 MDTLFRLVNFQQHHHHHHHQPDPSLNSTTTLTTSSSSRSSTQTPPTTTYHYYQQQQQQEDEECFNYYYMDNNNNDEDLSSSSSKQQYYYPYQPQHHVSTITTPNTTFNNTINTPTTTDNYSFSPPQDYFNFEILSGNSWAPNILLETARAISDNNNTNRIQQLMWMLNELSSPYGDTDQKIASYFLQALFSRINDAGDRTYKTLSFASDKICSFDSTRKMLLKFQEVSPWTTFGHVACNGAILEALEGAGNHRDALISLLRGLEPRVMTVVEEEADLEYCFSSEFVEGFGECLRWFRVYFEALEESFSRTSGEKLILEREAGRAIVDLISCDPYESVERREMASRWRRRLHGGGLNTVSFSEEICDDVRALLRRYREGWSMTQCSSDDNSNGIFLLWKDQPVVWASVWRP 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01373 410 MobiDBLite consensus disorder prediction 12 49 - -
Car07g01373 410 ProSiteProfiles GRAS family profile. 131 409 IPR005202 -
Car07g01373 410 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 249 409 IPR005202 -
Car07g01373 410 MobiDBLite consensus disorder prediction 23 49 - -
Car07g01373 410 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 249 IPR005202 -
Car07g01373 410 Pfam GRAS domain family 251 409 IPR005202 -
Car07g01373 410 Pfam GRAS domain family 142 249 IPR005202 -
Car07g01373 410 PANTHER PROTEIN SHORT-ROOT 249 409 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Car07g01373 410 PANTHER PROTEIN SHORT-ROOT 1 249 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01373 Car-Chr7 12807392 12809348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01373 236 410 GRAS Transcription Factor Family AT4G37650 59.444 3.67e-67 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car07g01373 GRAS 7.6e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01373 - - cam:101506038 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01373 07 12807392 12809348 Car07g01373 07 12807392 12809348 ECH
Car08g00423 08 3517391 3519334 Car07g01373 07 12807392 12809348 PCT