Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01358 ATGAAGAGAATGGAAAATGATGATGATGGTGTTGACATTAACAATGAAAATAATAATTGGTTGGGTTTTTCACTCTCTCCTCAAATGAATATTGGTGTTTCTTCACACACTCATCAGTCAAATGCTTCTTCTTCTGCTGCTTCTGAAGTTGTTCCAACAAGTTTTTACCATTCTGGTTCTCTTAGTAACTATGGTTTTTCTTATGGACTTGAAGCTGAAAATGTTGGGCTGTATTCGGTATTTCCTATTATGCCCCTCAAATCTGATGGATCTCTTTATGGTATGGAACCTCTTAGCAGGTCACAAACACAAGTAATGGCTACTAATTCAGCACCAAAACTGGAGAATTTCTTAGATAGTGAAGCTATGGGGACCCCTCATTATGCATGTAGTAGCGTCATCACAGAAACAATGCCTTTAAGCTTAGATAGTATGTTCCAAAATCAAGTTCAACACATGAATAACCAACAACAACAATTTCATAACCAAAACTTGTCATCATATTACTCAACTTTGAGAAACAATGATTTGTTGTTAGAAGGgtcaaagcaaagtcaaacatcaagtgaaagtcaCCATGTTTCAAACATGGTTGAGGATAATGGACTAACAAGCCTCAAGAGCTGGGTTTTGAGGAATTTTCCAACTAGCCATACAAATGAGTCAAAGATGATTGTTCCTGTCGTGGAGGAAAATGATCAAGGTGAATGCGGTTCCATTGGATCAATGGCTTATGGTGATTTGCATTCTTTGAGCTTGTCAATGAGTCCTAGCTCACAGTCTAGCTGTGTTACAAGCTCACAGCGTATGTCATCACCTGCTGTTATTGATAATTCTGCTGTTGTTGATACAAAGAAAAGAGGACATGAAAAGTTTGAACAGAAGCAAATTGTTCATAGGAAATCTATTGATACTTTTGGACAAAGAACTTCACAATATAGAGGTGTAACAAGACATAGGTGGACTGGAAGATATGAAGCTCATCTATGGGACAACAGTTGCAAGAAAGAAGGGCAAAGCAGAAAAGGAAGACAAGTTTATCTTGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATCAGGCAGCACTCAAGTATTGGGGACCATCCACTCACATAAATTTCCCTTTGGAAAATTATCAAAATCAACTTGAGGAAATGAAGAATATGACCAGACAGGAATATGTTGCTCATTTAAGAAGAAAAAGCAGTGGATTCTCAAGAGGAGCTTCCATGTACAGAGGAGTAACAAGACACCACCAACATGGTAGATGGCAAGCTCGAATCGGTAGGGTGGCTGGTAACAAAGATTTATATCTAGGAACATTCAGTACACAAGAGGAAGCAGCTGAAGCCTATGACATTGCTGCTATAAAATTCAGAGGAGCAAATGCAGTTACAAACTTTGACATAACAAAATATGATGTTGAAAAAATCATGTCAAGTAGTAACCTTCTAAGCATTGAACTAGCTAGAAAGAACAAAGAAGTAGATATTGGCACAACTCAATACATTGATCACAACAAGTCTCATTCTTCTTCATATGACAACACTCAAGAAACCATTTTAATGCAGAAGAACATGGTTCTGTATCAATCCTCCTCCCAACAACAACATGAACAGAATCCACCAAGAACTGAGACTGAAAAAACCCATCAATCTTTTTCCACAGTTTCTTTGGATAACATGTTTCATCAAGAAGTAGTAGTAGAGGAACCGAGTAAGACGAGAAATCGCGTGTCGAATCCTTCTTCATTGGCTACAAGTTTGAACAGTTCAAGAGAAGGTAGTCCTGATAGAACAAGCTTGCAGAATCTCTCTGAATCAATGCCTTCAAAACTATTGGTTTCTGCTCCAAATAGTAGCAATGTGAATTCTTGGGATCCTTCAACTCATCTTAGGCCTGCTCTTTCTAATTTGCCTCAGATTCCAGTTTTTGCTGCTTGGACAGATGCATAG 1965 0.3761 MKRMENDDDGVDINNENNNWLGFSLSPQMNIGVSSHTHQSNASSSAASEVVPTSFYHSGSLSNYGFSYGLEAENVGLYSVFPIMPLKSDGSLYGMEPLSRSQTQVMATNSAPKLENFLDSEAMGTPHYACSSVITETMPLSLDSMFQNQVQHMNNQQQQFHNQNLSSYYSTLRNNDLLLEGSKQSQTSSESHHVSNMVEDNGLTSLKSWVLRNFPTSHTNESKMIVPVVEENDQGECGSIGSMAYGDLHSLSLSMSPSSQSSCVTSSQRMSSPAVIDNSAVVDTKKRGHEKFEQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDQAALKYWGPSTHINFPLENYQNQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDITKYDVEKIMSSSNLLSIELARKNKEVDIGTTQYIDHNKSHSSSYDNTQETILMQKNMVLYQSSSQQQHEQNPPRTETEKTHQSFSTVSLDNMFHQEVVVEEPSKTRNRVSNPSSLATSLNSSREGSPDRTSLQNLSESMPSKLLVSAPNSSNVNSWDPSTHLRPALSNLPQIPVFAAWTDA 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01358 654 CDD AP2 413 474 IPR001471 GO:0003700|GO:0006355
Car07g01358 654 ProSiteProfiles AP2/ERF domain profile. 312 378 IPR001471 GO:0003700|GO:0006355
Car07g01358 654 Pfam AP2 domain 312 370 IPR001471 GO:0003700|GO:0006355
Car07g01358 654 Pfam AP2 domain 415 464 IPR001471 GO:0003700|GO:0006355
Car07g01358 654 CDD AP2 311 378 IPR001471 GO:0003700|GO:0006355
Car07g01358 654 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 16 652 - -
Car07g01358 654 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 652 - -
Car07g01358 654 SMART rav1_2 414 478 IPR001471 GO:0003700|GO:0006355
Car07g01358 654 SMART rav1_2 312 384 IPR001471 GO:0003700|GO:0006355
Car07g01358 654 MobiDBLite consensus disorder prediction 572 607 - -
Car07g01358 654 PRINTS Ethylene responsive element binding protein signature 313 324 IPR001471 GO:0003700|GO:0006355
Car07g01358 654 PRINTS Ethylene responsive element binding protein signature 454 474 IPR001471 GO:0003700|GO:0006355
Car07g01358 654 SUPERFAMILY DNA-binding domain 413 473 IPR016177 GO:0003677
Car07g01358 654 SUPERFAMILY DNA-binding domain 311 380 IPR016177 GO:0003677
Car07g01358 654 ProSiteProfiles AP2/ERF domain profile. 414 472 IPR001471 GO:0003700|GO:0006355
Car07g01358 654 MobiDBLite consensus disorder prediction 577 607 - -
Car07g01358 654 Gene3D AP2/ERF domain 311 380 IPR036955 GO:0003700|GO:0006355
Car07g01358 654 Gene3D AP2/ERF domain 414 474 IPR036955 GO:0003700|GO:0006355
Car07g01358 654 MobiDBLite consensus disorder prediction 534 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01358 Car-Chr7 12663018 12666755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01358 395 654 AP2-EREBP Transcription Factor Family AT4G37750 25.597 1.41e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Car07g01358 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01358 K09285 - gmx:100792451 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00405 08 3351266 3354536 Car07g01358 07 12663018 12666755 PCT