Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01355 ATGGGGAGGGCTCCTTGCTGTGACAAAGCCAATGTCAAGAGAGGTCCATGGTCCCCTGAAGAAGACTCCAAACTCAAAGCTTATATCCAACAACATGGCACCGTTGCCAACTGGATAGCCCTGCCCCAAAAAATAGTAGATCTCAAAAGGTGTGGGAAAAGTTGTCGTCTTAGATGGCTGAACTATCTCCGTCCAAACCTTAAACATGGGATCTTCTCCGAAGAAGAAGACAACATTATTTGCAGCCTCTATGTCAATATTGGAAGCAGGTGGTCCGTCATAGCAGCACACTTACCAGGACGAACAGATAATGATATAAAAAACTATTGGAATACAAAGTTAAAGAAGAAGCTCTTAACAAAGCAAAGGAAAGAGCAACAAGCTCAAGCTCGCAAACTTTTCAGCTTAAACCAAGAGATTAAAAGAGAGAGTGGAAATTTGTTATTACCTGTTGAAGTAATCCCCCAAACTCATAATGATTGGCCTATAGAACACTACTCCTTTCCCATACCAATAACAAAGGCTTCTTCCGTTCAAGACAATAACCTCAACAATATACAAACATTATCCATTAAAAATTTGGAAACCAAACTAGAGGAAGTTGAATTTTCTGATAGTAATCAATTGCAGCAAATTAATGTCAACATTAATTCTCAATATCCATGTGACATTTACTTCCCACAAGATCAACTATATTATCCATCAACAGAAAGCATTAATTGGGGAGATATTATGAGTTCTTTGGTTTCTGACATTGAAGGTTGCAACCAAACAATGCCTCAAGAAGATGTTACTTTCGATGAGTCTATGTTCTATGGAATTATGCAATGTTTGCAAACGCAGTAA 846 0.383 MGRAPCCDKANVKRGPWSPEEDSKLKAYIQQHGTVANWIALPQKIVDLKRCGKSCRLRWLNYLRPNLKHGIFSEEEDNIICSLYVNIGSRWSVIAAHLPGRTDNDIKNYWNTKLKKKLLTKQRKEQQAQARKLFSLNQEIKRESGNLLLPVEVIPQTHNDWPIEHYSFPIPITKASSVQDNNLNNIQTLSIKNLETKLEEVEFSDSNQLQQINVNINSQYPCDIYFPQDQLYYPSTESINWGDIMSSLVSDIEGCNQTMPQEDVTFDESMFYGIMQCLQTQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01355 281 Pfam Myb-like DNA-binding domain 14 63 IPR001005 -
Car07g01355 281 Pfam Myb-like DNA-binding domain 72 112 IPR001005 -
Car07g01355 281 SUPERFAMILY Homeodomain-like 11 110 IPR009057 -
Car07g01355 281 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
Car07g01355 281 PANTHER TRANSCRIPTION FACTOR RAX3-LIKE 1 252 - -
Car07g01355 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Car07g01355 281 Gene3D - 71 142 - -
Car07g01355 281 Coils Coil 123 143 - -
Car07g01355 281 PANTHER OS09G0431300 PROTEIN 1 252 - -
Car07g01355 281 CDD SANT 72 111 IPR001005 -
Car07g01355 281 CDD SANT 16 63 IPR001005 -
Car07g01355 281 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Car07g01355 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 63 IPR017930 -
Car07g01355 281 Gene3D - 7 69 - -
Car07g01355 281 SMART sant 68 116 IPR001005 -
Car07g01355 281 SMART sant 13 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01355 Car-Chr7 12609456 12610888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01355 1 207 MYB Transcription Factor Family AT3G49690 57.746 1.57e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car07g01355 Myb_DNA-binding 3.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01355 K09422 - gmx:100792374 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00402 08 3292951 3294636 Car07g01355 07 12609456 12610888 PCT