Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01345 ATGTTGACACAAAGGACAGCGACCATGATGTATAATCTAAGCTTGTCTTTTAATGGGTTGAAAATAGATCTTACTATCTCATCTACTTTTCTTCAAACAAGTTTTACCATTACAAGCAATTCAAGCTCAAAGATGATTCAAATTTCATCAACCAACTACCAACCTGAATTATTTGGAATGGAGGATCCTACTTTCTTTGATGATCAAGAATACACAATGGATTCATTTGCATTTCACTTTGATGATATTGATTTCAAACCTTTCTCAGCATCTCCAGAGAGTTTTTCCTCTCATAATAGCAATCACAAGCGTTTTAATTCTGAAAGTCCTAACCTATCTGTTGCATCAGTACAACCAACAAAACAACTCAAAACTACTTGGAATAATACTTATGGAAGTGATTCCATGAATAAGAATATTATTCCAAAGGCTTCTAATTCATCTCCATCTTCCAAAATCATTTCTTTTGATTTTGACCACTCCAATACATCTTCAGTTAGTTCTCAACAATTCTACAACATGGTGAAGAAGCCTAAAACTGAGATTGCATATGGCAAAAACTTGAATTTTGAGGCAGTAATTTCTCAAGGTGATTATGATAATAAACTAGAGAACAAGGTTTCCACAACAACGACGACTCAAAGAAACTCAATCCAGGCTCGAGATCACGTAATGGCCGAACGAAAACGAAGGGAGAAGCTCAGTCAGAAGTTCATTGTTCTTTCCTCCATGATTCCTGGACTCAAAAAGATGGACAAGGCAACTATTTTGGAAGATGCTATAATGAATACTTTGGAGGAACAAGCAGCCGTCGACCGAACAGTCGAGTCAGCTGTTTTTGCGAAGAGATCAATTCTCTTTGCTGATGATGATCATAACTCGTCTTGCGACGAGAACGCAGACCAATCAGTCCCTAAAATTGAAGCAAGAGTTTCTGGAAAAGATATGCTCTTAAGAATCTATTGTGACAAACACAATGGCAGAGCTGCAACTGCAATACTTTGTGAATTGGAAAAACATCATCTCACTATTCAGAGTAGTTGTGCTTTTCCATTTGGAAATAACTATCTTGACATAACCATTGTTGCTAAGATGAATAAAGAATACTGCTTGACAATAAAGGATCTGATAAGAAGTATAAGTCAGGTTTTGAGGCAGCTCATTTGA 1167 0.3642 MLTQRTATMMYNLSLSFNGLKIDLTISSTFLQTSFTITSNSSSKMIQISSTNYQPELFGMEDPTFFDDQEYTMDSFAFHFDDIDFKPFSASPESFSSHNSNHKRFNSESPNLSVASVQPTKQLKTTWNNTYGSDSMNKNIIPKASNSSPSSKIISFDFDHSNTSSVSSQQFYNMVKKPKTEIAYGKNLNFEAVISQGDYDNKLENKVSTTTTTQRNSIQARDHVMAERKRREKLSQKFIVLSSMIPGLKKMDKATILEDAIMNTLEEQAAVDRTVESAVFAKRSILFADDDHNSSCDENADQSVPKIEARVSGKDMLLRIYCDKHNGRAATAILCELEKHHLTIQSSCAFPFGNNYLDITIVAKMNKEYCLTIKDLIRSISQVLRQLI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01345 388 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 218 267 IPR011598 GO:0046983
Car07g01345 388 Pfam Helix-loop-helix DNA-binding domain 222 261 IPR011598 GO:0046983
Car07g01345 388 SMART finulus 224 271 IPR011598 GO:0046983
Car07g01345 388 Gene3D - 213 276 IPR036638 GO:0046983
Car07g01345 388 MobiDBLite consensus disorder prediction 96 117 - -
Car07g01345 388 PANTHER BHLH TRANSCRIPTION FACTOR 45 386 - -
Car07g01345 388 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 220 268 IPR036638 GO:0046983
Car07g01345 388 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 45 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01345 Car-Chr7 12461532 12465260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01345 65 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 33.430 3.34e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car07g01345 HLH 3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01345 - - mtr:MTR_4g097920 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01345 07 12461532 12465260 Car07g01345 07 12461532 12465260 ECH
Car08g00390 08 3169663 3171279 Car07g01345 07 12461532 12465260 PCT