Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01342 ATGGCTGGTTTGGATTTAGGAAGTGCATCTCGCTTTATGCAAAACCTTCAAAGACAGCAACAAGACTTGCACCTTCAACAACAACATCACCACAACCATCACGATTCTGAACAAGAATCGAATCgtggtggtgctggtggtggtggtCCTTTTTCGTCAAACGACGAAGACGAGCGAAGCCAAGGCTTGGAGCTAGGTTCGGCGGCAGGACCTGGTGACGTGGTAGGACGTCGTCCACGTGGCAGACCACCAGGCTCGAAAAACAAGGCGAAACCTCCGGTGATCATCACAAGAGAGAGCGCCAACACACTGAGGGCTCATATTCTAGAAGTTGCCAGCGGTTCCGATGTTTTTGAATGCGTAACTAACTACGCTCGCCGTCGTCAGCGTGGGATCTGTGTTTTAAGCGGAAGTGGAACTGTTACTAATGTCACTCTCCGACAGCCGGCGGCGGCTGGTGCTGTTGTTACGCTTCATGGGAGATTCGAGATACTGTCCCTTTCTGGATCTTTTCTGCCTCCGCCGGCTCCTCCGGGAGCAACTAGTTTGACAATTTACCTTGCCGGAGGTCAAGGACAGGTGGTCGGAGGGAGTGTGGTTGGTGAACTTACGGCGGCGGGACCGGTGATTGTGATTGCTGCTTCGTTTACTAATGTTGCTTATGAGAGGTTGCCTTTGGAGGAAGAAGAACAGATTCAGATGCAGGCGGCGGCTGGAGGAGGTTCTCAAGGCTCtggtggtggtggtggtggtggtggtggtggAGTTGTGAATAATGCTTTTCCTGATCCTTCTTCTGGTTTGCCGTTTTTCAATTTGCCATTGAATATGCAGAATGTTCAGATGCCAGTTGATGGTGGTTGGGCGGGAAACAACAATTCAGCTTCACGTCCACCTTTTTGA 903 0.4751 MAGLDLGSASRFMQNLQRQQQDLHLQQQHHHNHHDSEQESNRGGAGGGGPFSSNDEDERSQGLELGSAAGPGDVVGRRPRGRPPGSKNKAKPPVIITRESANTLRAHILEVASGSDVFECVTNYARRRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEEEQIQMQAAAGGGSQGSGGGGGGGGGGVVNNAFPDPSSGLPFFNLPLNMQNVQMPVDGGWAGNNNSASRPPF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01342 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 300 IPR014476 GO:0003680
Car07g01342 300 MobiDBLite consensus disorder prediction 24 40 - -
Car07g01342 300 CDD DUF296 105 188 IPR005175 -
Car07g01342 300 Gene3D - 104 238 - -
Car07g01342 300 ProSiteProfiles PPC domain profile profile. 101 238 IPR005175 -
Car07g01342 300 MobiDBLite consensus disorder prediction 235 259 - -
Car07g01342 300 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 233 - -
Car07g01342 300 PIRSF ESCAROLA 8 300 IPR014476 GO:0003680
Car07g01342 300 Pfam Plants and Prokaryotes Conserved (PCC) domain 105 218 IPR005175 -
Car07g01342 300 MobiDBLite consensus disorder prediction 19 95 - -
Car07g01342 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01342 Car-Chr7 12383967 12385651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01342 1 300 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 66.032 3.88e-100 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01342 - - pvu:PHAVU_003G230600g 369.007