Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01341 ATGGATTCCCGCTCAGTTCCACCACCATCAAACATGATGGTGGGACCCACATCTTATACTCCAACTAACTCCTCCATGATCAGCCCTAATTCCTCCACCAACATCATGGCTCCCGCCACCGCACGATTTCCCTTCAACTCGCCGCAAACCTCGGAGCCTTTCTCCGTCACACACGACGGTCCCTCTTCTCCATCCGCCCTTGCTAAGAAGAAGCGTGGCCGGCCTAGGAAATACTCTCCCGACGGTAACATTGCCCTTGGTTTAGCTCCCACACATGTTTCTTCTCCCGTCGCTGCTACCTCCGCTTCCGCCGGTGATTCCGGCGCCGGTGATGCTCCTCCGAAGAAGCATAGGGGTAGACCCCCTGGCTCCGGGAAGAAGCAGTTGGATGCGCTTGGAGCTGGTGGAACTGGATTTACTCCACACGTAATCTTGGTGGAGTCTGGTGAGGACATTACAGAAAAAGTTATGGCCTTTTTTCAGATAGGGCCTCGGACAGTTTGTATTCTTTCTGCCACCGGTGCAGTCTGCAATGTAACCCTTCGGCAGCCAGGATTATCTGGAAGTATTACAAGATTCGAGGGGAAATTCGAGATTGTATCGTTATCAGGTTCGTTGAGGCTATCTGAAAATAATGCTGAACATAACAGAACAAGCAGTTTATACGCTTCCCTTGCGGGGTCTGATGGACGAGTTTTTGGTGGTGCAGTTGCTGGAACGCTAACTGCAGCGTCAACTGTTCAGGTCATTGTGGGTAGCTTTATTTTGGATCGGAAAAAGTCAAGCTCAAGTATGCTGAAATCTGGGCCTTCTTCAGAACCAACATCCCAAATGTTGCACTTTGGGGCACCTACGACACCAACTAGTCCTACTTCTCAAGGGCCTTCTACCGAGTCCTCGGAGGAAAATGATCATAATAGTAATTTTAGTAGGGGGCCTGGACTCTACAATAATGCCAATCAGCCTGTTCATCACAATATGCAGCAGATGTATCACCATCCACTATGGGCTGGCCAAACTCATCAGTGA 1029 0.5005 MDSRSVPPPSNMMVGPTSYTPTNSSMISPNSSTNIMAPATARFPFNSPQTSEPFSVTHDGPSSPSALAKKKRGRPRKYSPDGNIALGLAPTHVSSPVAATSASAGDSGAGDAPPKKHRGRPPGSGKKQLDALGAGGTGFTPHVILVESGEDITEKVMAFFQIGPRTVCILSATGAVCNVTLRQPGLSGSITRFEGKFEIVSLSGSLRLSENNAEHNRTSSLYASLAGSDGRVFGGAVAGTLTAASTVQVIVGSFILDRKKSSSSMLKSGPSSEPTSQMLHFGAPTTPTSPTSQGPSTESSEENDHNSNFSRGPGLYNNANQPVHHNMQQMYHHPLWAGQTHQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01341 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 138 255 - -
Car07g01341 342 MobiDBLite consensus disorder prediction 1 62 - -
Car07g01341 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 312 IPR039605 GO:0003680
Car07g01341 342 MobiDBLite consensus disorder prediction 1 133 - -
Car07g01341 342 Gene3D - 141 268 - -
Car07g01341 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 254 IPR005175 -
Car07g01341 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 30 312 - -
Car07g01341 342 ProSiteProfiles PPC domain profile profile. 136 275 IPR005175 -
Car07g01341 342 SMART AT_hook_2 69 81 IPR017956 GO:0003677
Car07g01341 342 SMART AT_hook_2 115 127 IPR017956 GO:0003677
Car07g01341 342 MobiDBLite consensus disorder prediction 262 321 - -
Car07g01341 342 CDD DUF296 140 254 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01341 Car-Chr7 12373129 12377673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01341 68 342 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 46.497 4.18e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01341 - - var:108323770 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00380 08 3084027 3087074 Car07g01341 07 12373129 12377673 PCT