Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01335 ATGGGTTGCACGGTGAGAGAAAAACACATCAGAGCTAATCGGAGAACCCGATCGTTGAAACCCGAACCCGATTCTTCGGATAACAAAGACGCAATATCCAAATCCATTGCGGAGTCTGGTCTCAAACCCTTCAAATACAATATATCTCTCGCCGATTCGTCTTCCAAGAATCCTTTTCCTCTTCCCTGTCCAAACCCTAATGCTGATGAATCTGGTTGGGGTTACTGCACCGAGGAACAGTTGGAAGAGATCCTCTTGAAAAACTTGGAATTAGTTTACAGCGAAGCTGTTTCGAAGATTGTTGCTTTGGGTTACGATGAAGATGCTGCCTTGAAGGCCATTTTGAGAAATGGTCATTGTTATGGTGGTATGGATGTTTTGACTAATATCTTGCATAATTCTTTAGCGTATTTGAATAGCAAtggtagtgttgtcggtgttggtgttagtgtaggtgtcggtgttggtgttggtgatggggttggtAATAGTGATAATTTGGATGAGTCTGAGCCGGTTTTCGCCGACTTGAGGCAGTTAGAGGAGTACTCTTTAGCTGGTATGGTTTGTTTGTTGCAACAGGTTAGGCCTAATTTGAGTAAAGGTGATGCAATGTGGTGTTTGCTTATGAGTGATCTTCATGTAGGAAGAGCTAGTTCTATGGAGATTCCTGTGCCTGGTGGGAGCGGGAGTCCCCCTGCTCCATTGCCTGTTTCTGTTGAGCCCGGTAGCAATTCAGGTGGCGTTATGGCTCCTCCCTTGTGTAGGTTTCATGGGGGTTGGGGATTTGGAAATGGGGGAAGCTTGGATTATTCGGTGAATGGGGCCTTTTCGTGCGGTACGGATTTGAAATCGCAGTTGCAAAGAGATATTGAATTTCCAAAGAGGTTGGATCTTTCTCCCCAGTTGAAGGCTTTGTTGAAGAGAAATGTTGCCATGTTTACTGCTGGTTTTAGAGCAAACACCAAACAACTGCAGACGCAGGCGAAGGGTGCCTTTCCTGTCCGTAGTGCCGTGCCTAATTCGGATTCCCCGGTTGTATCTGGAGCTGAAGTCACGGTTGATCAGTGTGGACATTCTCAGATTCTTGATAACCAAGATGCTGTGAACTCGGTGCTGAATAAATTCCGTGACTTGAATCTTGATGAGAATTTGGAGTTTGTGGCAGAGGATCAGAAGGATGAGGTGATCGTAACTTTATTTCATCAGATTAAGGATTTGGAGAAGCAGGCCAAGGAGAGAAAAGAATGGGCTCATCTAAAAGCGATGCAAGCTGCGAGGAAGCTAAGCAGTGATTTGACTGAGCTCAAAACGTTAAGGATGGATAGAGAGGAGACTCAAAAATTGAAGAAAGGGAAACAGGCACTTGAGGACACAACCATGAAGCGACTCTCAGAGATGGAGAATGCTTTGAGAAAGGCTAGTGGTCAAGTGGACCGTGCAAATGCAGCTGTGAGAAGACTAGAGACCGAGAATGCAGAAATCAGAGCAGAGATGGAGGCTTCGAAATTAAGTGCATCAGAATCAGTGACAGCTTGCTTAGAAGTTGCAAAAAGGGAGAAGAAATGCTTGAAGAAACTTCTAGCTTGGGAAAAACAGAAAGCTAAGCTACAGAAGGAGATTTCCGGTGAGAAAGAGAAGATATTAGAGGCACAAGAAGCGTCGGCTCAGAATACACAGCGTCAAAAAGAATCTGAGGTTAAATGGAAGGATGAATTGAAGGCTCAAGAGGAAGCTTTGGCACTAGTTGAGGAGGAGCGCCGTGCCAAGGAAGCAGCCGAGTCAAATAATAAGAGGAGGTTTGAGGCTCTGCGTCTGAAGATAGAGATAGATTTCCAGCGCCACAAGGATGATCTACGTAGACTTGAGCACGACCTTTCGCGCCTTAAAGTATCTGCGCAATCTGCTGAGTTGCATCACCGATCAATTACTTTACCTAAAAGTGACTTTGAGGCTGCAAAGCCTCAAAGAGAGTCAATTGCTAAGCTGCTTCTGGAATTGGATAATTTGGAAGACTTTTCAGAAAAAGAAGTTAATAGCAACAGAGAATGCATTATCTGTATGAAAGATGAAGTGTCCATTGTTTTCTTGCCGTGTGCTCATCAAGTCATGTGTGCTAGTTGCAGTGATGAGTATGGAAAAAAGGGTAAGGCTGCTTGTCCTTGCTGCCGAGTTCAAATCCAACAGAGAATCCGCGTATTCGGGGCATGTTCTTAA 2217 0.4335 MGCTVREKHIRANRRTRSLKPEPDSSDNKDAISKSIAESGLKPFKYNISLADSSSKNPFPLPCPNPNADESGWGYCTEEQLEEILLKNLELVYSEAVSKIVALGYDEDAALKAILRNGHCYGGMDVLTNILHNSLAYLNSNGSVVGVGVSVGVGVGVGDGVGNSDNLDESEPVFADLRQLEEYSLAGMVCLLQQVRPNLSKGDAMWCLLMSDLHVGRASSMEIPVPGGSGSPPAPLPVSVEPGSNSGGVMAPPLCRFHGGWGFGNGGSLDYSVNGAFSCGTDLKSQLQRDIEFPKRLDLSPQLKALLKRNVAMFTAGFRANTKQLQTQAKGAFPVRSAVPNSDSPVVSGAEVTVDQCGHSQILDNQDAVNSVLNKFRDLNLDENLEFVAEDQKDEVIVTLFHQIKDLEKQAKERKEWAHLKAMQAARKLSSDLTELKTLRMDREETQKLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIRAEMEASKLSASESVTACLEVAKREKKCLKKLLAWEKQKAKLQKEISGEKEKILEAQEASAQNTQRQKESEVKWKDELKAQEEALALVEEERRAKEAAESNNKRRFEALRLKIEIDFQRHKDDLRRLEHDLSRLKVSAQSAELHHRSITLPKSDFEAAKPQRESIAKLLLELDNLEDFSEKEVNSNRECIICMKDEVSIVFLPCAHQVMCASCSDEYGKKGKAACPCCRVQIQQRIRVFGACS 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01335 738 Coils Coil 527 554 - -
Car07g01335 738 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 670 735 IPR013083 -
Car07g01335 738 SUPERFAMILY RING/U-box 683 730 - -
Car07g01335 738 Coils Coil 612 639 - -
Car07g01335 738 PANTHER OS05G0141500 PROTEIN 1 737 IPR046934 -
Car07g01335 738 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 737 - -
Car07g01335 738 Coils Coil 566 596 - -
Car07g01335 738 MobiDBLite consensus disorder prediction 16 31 - -
Car07g01335 738 Pfam Zinc finger, C3HC4 type (RING finger) 681 729 - -
Car07g01335 738 Coils Coil 464 505 - -
Car07g01335 738 MobiDBLite consensus disorder prediction 1 31 - -
Car07g01335 738 ProSiteProfiles Zinc finger RING-type profile. 684 724 IPR001841 -
Car07g01335 738 Pfam Family of unknown function (DUF6592) 88 221 IPR046527 -
Car07g01335 738 SMART ring_2 684 723 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01335 Car-Chr7 12313568 12318313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01335 670 734 C3H Transcription Factor Family AT1G73950 37.681 2.55e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01335 - - gmx:100777787 1058.13