Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01332 ATGGGAGAAGCATTATTGCCACCAGGTTTTCGTTTCCATCCAACTGATGAAGAACTAGTAGGATACTACCTTAAAAGAAAAGTGGAAGGACTTGAAATTGAGCTTCAAGTTATTCCAGTAATTAATTTTTACAAATTTGATCCATGGGAGTTGCCTGAGAAATCATTTTTGCCAAAAGGAGATTCAGAATGGTTTTTTTATTGCCCGCGCGATCGAAAGCACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGCTACTGGAAAGTCACTGGAAAAGAGAGAAAGGTGGTGTCCCAATGTACTTCATCCACTATCACTGGTAGCCGCAAAACACTTGTTTTCTATCTTGGTAGGGCGCCTTTAGGCGATAGAACTAACTGGATCATGCATGAGTATCGCCTCACCGATGATTTAGTTCAACACTCCTCATTTTTGAAGGGTGGTTTGGCTTTGTGCCGAGTTATTAAAAAGAATGAGAAGAGCAAGAGGGCTGCAACAAGTTTGGTTAATAGAAATGAGATCTCAATGAGATTCTCAAGTGAGCCCTTTTGCAAATCTGGTGATGTTTCTTCTCAAGCAAGTCACCTGAATAATGAGAGTGGATATTCAAGTCCTGTTACTTCTCCACAAAATGTGGCTCCAATTGCTGAGTTTAACCATGTTTCCAAAGAAACTAATCCTTCAAACTTCTGGATCTCCTCTGATATGATTCTTGATTCTTCAAAGGAGTTTACTCAAGTAAAAGATGTAGTGTCTCAATATTTTCCTAGGTGTGATTCACCAAGGCAATCAGAACATACAACAATTTCACCTAGTTTATCTTACTCAAATTTCAACAGTGAAATTGAATTTGTTTATAATCCAAGTCAAATTGGCTACATGTCACCTTACTCAAATCAAGTGAATTTAATGGACAATTATGGAAATTGGAATGTTCCTTATGAGGGTTACGATAAACTTAATTTAGTCTCATATCAAGAGCCTTTCTAA 996 0.3785 MGEALLPPGFRFHPTDEELVGYYLKRKVEGLEIELQVIPVINFYKFDPWELPEKSFLPKGDSEWFFYCPRDRKHPNGSRTNRATKAGYWKVTGKERKVVSQCTSSTITGSRKTLVFYLGRAPLGDRTNWIMHEYRLTDDLVQHSSFLKGGLALCRVIKKNEKSKRAATSLVNRNEISMRFSSEPFCKSGDVSSQASHLNNESGYSSPVTSPQNVAPIAEFNHVSKETNPSNFWISSDMILDSSKEFTQVKDVVSQYFPRCDSPRQSEHTTISPSLSYSNFNSEIEFVYNPSQIGYMSPYSNQVNLMDNYGNWNVPYEGYDKLNLVSYQEPF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01332 331 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Car07g01332 331 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 331 - -
Car07g01332 331 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Car07g01332 331 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Car07g01332 331 MobiDBLite consensus disorder prediction 191 210 - -
Car07g01332 331 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 331 - -
Car07g01332 331 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01332 Car-Chr7 12300152 12301847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01332 1 311 NAC Transcription Factor Family AT4G17980 51.104 6.87e-99 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car07g01332 NAM 1.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01332 - - mtr:MTR_4g098630 480.715