Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01330 ATGGGAACTGGAGTTTCCAGGTTGTGTTCTTGCTTAGAACCGGTTAACCGTACCAAACGAACCGAACACCAAGACGTTATATTCACAGCCACTGATCCATTAGATGAAACCCTAGGTCACTCTTTCTGTTACGTTAGATCTTCAGCTCGCTTTCTCTCTCCTTCTCACTCCGATCGTTTTCTCTCACCTTCTACTTCTCTTCGTTTTTCGCCCACTCACGACTCGGTTCCTAAAACCCGACCCGATTTTCCAGAAACCGCTTTCAAAGCCATTTCTGGTGCTTCCGTTAGTGCTAATAGCTCGGTTCCCAAAACGGTTATTCAGCTAGAAGAAGATGCTTCTGCTTCCGCTAATCACGCTGCGGATTCCGCTTGTGGTGGTGTAACTAAGGGTAATATAGTCAATGGCTTTGAAAGTACGTCGTCGTTTAGTGCTCTTCCGCTTCAGCCTGTTCCGAGAGGCGGTGAGCTTTTTGAGGGGAGTGGTTTTTTCCTCTCCGGTCCGATTGAGAGCGGCGCGCACTCTGGACCGATACATGCTGATGGCGGTGTCTCAGCTGGAATCTCAAGCGGCGGAGATGTACCTTTCTCCGCGCCGTTAGGGGGGATGTACGGGAGGAAAAAAGGTGTGTCAGGGTTTAGGAAGGCGTTTCAACGGAAAGTGTCGGAGAAGAAACGGCCGTGGGTGGTGCCGGTGTTAAACTTCGTCGGGAGGAAGGAGGTTCCGGCGAATGAGGGGAAGGCGAAGCCGGTAGAGACGAAGAGTGAGAGCAATGTGCAGTGGGCGTTAGGGAAGGCTGGGGAGGATCGGGTTCATGTGGTGGTGTCGGAGGAGCAGGGGTGGTTGTTTGTTGGGATTTACGATGGTTTCAACGGTCCTGATGCGCCGGAGTTTCTGATGGGTCATATGTACCGTGCTGTTCACAACGAGCTTCAGGGTTTGTTTTGGGAAGTTGAAGAACAAGGAGACAGTAATAATCCTGTTGTGGTGAAAAACAAAACGGAGGGAGAAAATTCGAGTTCGGGTTTGGTGAATATGGTTCAtggagctgaaactggaactgtaaccgggacggaGAGTAAACGGCGTAGGCTATGGGAGTTTCTGGCTGAAGACCCTGAAGATGGACTTGACCTTTCTGGGTCTGATAGGTTTGCATTTTCTGTTGATGATGCACTTAGTGTTAGCAATGCCAATGCGGGTTCTGCCGGTAGTAGACGGTGGCTGTTGTCCAAACTGAAGAACGGTTTGTCAAAGCATAAGGAAGGTAATGGTAGGAAGTCGTTGCCGTGGAATTTGGGGAATGAGGAAGAGAAAGAAGAAAAATTGGAGACGGAAAATAAGCCTTCTGCTTCTGGCACTGGCGGTGCAAATGGTGGGAGGAGGCGGAAATTGGGTCCGGTCGATCATGATTTGGTTTTGAATGCAATGTCTCGGGCGCTTCAAGTGACTGAGCTTGCGTATTTGGATATGACAGATAAGCTTCTGGATACAAATCCTGAACTTGCTTTGATGGGTTCTTGTCTGTTGGTTGTTTTGATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGTCGAGCAATCGTTGCACATTATGAGCCCAAGGAGAATCAAGATACTCTGAATGTGGAATCTGCGAGCAAGGGAGGAGTTGTTGTTGTTGGTGGTTCCAGCACTGAGAGCATAGTTGAGGAGTCCTTAGCATTAGATCAAACTCAAACTGAAAGTGCAATGAAGGTGGGGAATCAGGGTCCTGCTCAAGAGACGAGGTTGGCGGCATTACAGTTGTCTACTGACCACAGCACCAGCATTGAAGAAGAAATCATTAGAATTAAAAATGAGCATCCCGATGATCCCCATTGTATAGTTAATGATAGAGTTAAAGGCCGTCTTAAGGTCACCAGAGCATTTGGGGCCGGATTTTTGAAACAGCCGAAGTTGAATGATGCAGTACTTGAAATGTTTCGCAATGAATATATTGGCACTGATCCATATGTATCCTGCTGTCCTTCACTACGTCACCATAGATTATGCCCAAGGGATCAGTTCTTGATCCTCTCATCTGATGGTTTGTATCAATATCTAAACAATGATGAAGTTGTCTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGAAGGAGATCCTGCCCAACATTTAATAGAAGAACTGCTCCTCCGTGCAGCCAAAAAGGCTGGAATGGATTTTCATGAATTGCTGGATATCCCGCAAGGAGATCGGAGGAAGTATCATGATGACGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCAGGGAAATATCTGTGA 2328 0.4656 MGTGVSRLCSCLEPVNRTKRTEHQDVIFTATDPLDETLGHSFCYVRSSARFLSPSHSDRFLSPSTSLRFSPTHDSVPKTRPDFPETAFKAISGASVSANSSVPKTVIQLEEDASASANHAADSACGGVTKGNIVNGFESTSSFSALPLQPVPRGGELFEGSGFFLSGPIESGAHSGPIHADGGVSAGISSGGDVPFSAPLGGMYGRKKGVSGFRKAFQRKVSEKKRPWVVPVLNFVGRKEVPANEGKAKPVETKSESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHMYRAVHNELQGLFWEVEEQGDSNNPVVVKNKTEGENSSSGLVNMVHGAETGTVTGTESKRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVSNANAGSAGSRRWLLSKLKNGLSKHKEGNGRKSLPWNLGNEEEKEEKLETENKPSASGTGGANGGRRRKLGPVDHDLVLNAMSRALQVTELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKENQDTLNVESASKGGVVVVGGSSTESIVEESLALDQTQTESAMKVGNQGPAQETRLAALQLSTDHSTSIEEEIIRIKNEHPDDPHCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTDPYVSCCPSLRHHRLCPRDQFLILSSDGLYQYLNNDEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01330 775 Gene3D - 239 770 IPR036457 -
Car07g01330 775 CDD PP2Cc 469 763 IPR001932 -
Car07g01330 775 MobiDBLite consensus disorder prediction 417 447 - -
Car07g01330 775 PANTHER PROTEIN PHOSPHATASE 2C 29 19 773 - -
Car07g01330 775 ProSiteProfiles PPM-type phosphatase domain profile. 252 763 IPR001932 -
Car07g01330 775 Pfam Protein phosphatase 2C 596 731 IPR001932 -
Car07g01330 775 PANTHER PROTEIN PHOSPHATASE 2C 19 773 IPR015655 GO:0004722|GO:0006470
Car07g01330 775 MobiDBLite consensus disorder prediction 417 464 - -
Car07g01330 775 SMART PP2C_4 252 761 IPR001932 -
Car07g01330 775 SUPERFAMILY PP2C-like 264 764 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01330 Car-Chr7 12268333 12274001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01330 1 775 PP2C-type Phosphatase Gene Family AT2G35350 55.231 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01330 - - mtr:MTR_4g098650 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01330 07 12268333 12274001 Car07g01330 07 12268333 12274001 ECH