Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01322 ATGGGGGTTGAAATGACCACCAACACATTCCTTCCTTCTTTCTCATCGTTTACTTCTGGCATATTGAGAGCCATGGGTAGCATTTCAAATGGAGCTGATGATGGAGGTAGTCAGTCACCAGTATCCCCAGAAGAAGTTGAGAATGGAGGTAGTCAGTCATCAGTATTTCCAGAAGAAGCTGATAACGAAGATAACACTAgaggaggaggaggaggagggagaggagATGGTAATCTAAAGAAAGGTACATGGACATCGGCAGAGGATGCAATTTTGGTAGAATATGTTCAAAAATATGGAGACAGAAATTGGAGTGCAGTCCAAAAAAAATTTGGACTTGCCCGATGCGGGAAAAGCTGTCGTCTACGATGGACAAATCATTTGAGACCAGATCTCAGAAAGGGTGCATTTACTGCAGAAGAAGAAAAGTTACTTGTTGAACAACACTATATACTGAGAAATAAATGGGCTCAAATTGCTCTAGCGTTCCCTGGTCGCACAGATAATGAGATAAAGAACTATTGGCACACAAGAAGTAAGAGATTGAAAAAAGCTGGCTTACCCATCTACCCCGAGGAAGTAGTGGAAAGGGCGAAAAACATGAATCAAGAACATTTAAATGTAGACGTGGGAGCCGACCAAGGTGATGACAATAATTCACAGATAGAAAATTTCGAGATACCTGAAGTGGTATTTAAAAGTTTCAAACTCCGACCAGAAGCAATTGTTCTACCACCGTATTTAGATATGCAAGGAAGTGGCTCGGTTGATCAAAGTATAGACTCCATCTATAATATCTTGTTGGGACCCCCCTCAAAACGCGCTAGATTAGAAGATACAACATTCAATGCTTTGGACAATACAACATTCAATAATAATTCAGACAGTTACACTGTTGCTATCCCAATATTTGATCAATGTGAAAAGTATTGTATGTTGTCTCCTCCCAGTGATACCATTCTCTGTGCCAGCAATGGATATGACGATAACCTTATTATTGGTAGTCATGCCGCATTAAATGACAATATCTCTCCTTTTGAGTCTGATGGGTCCATGATGAATGAACTTAATATCGACCGTCATGTCGCATTAAATGACACTGTCTATTCTTCTGAGCCCATAGACGGGTGCACGAGTAATGAGCTCCCTTCAATCCAATATTTACAGACTCAACAATGTAGCTTGGACACGCCTGTGTCCCGATTTCCTATACATGAATCTGTCGACACATCGATTCAATTTCCTCCAATTGAGGATCCTAATCAATCGGTTTTTGTTTATCCTGCGAGTGGTGATTTACTCAATACAAGATCATTGCAGGACAATTCAAATGACACAAATCTGCAAGAGGGAATAGAAAAATCAGCGCCCAAGAGCGTAGCTTACGATGACATTTGTGCAGATTGGGATGAGTCTTCTGCTCCATTGTTGTATTCTGACTACTACAGTATTGATATTAGCATGTTTTCAATCGATGAGCCCTACTTTAAACCATTCAGAAAAGTTTTCTGCATTTGGTCTGCCAAAGAACTATTAACTAATGAGGCACAAAGACTAAGTTGTTTGGTTCTCCTCCTCACCTTTAAGAAACAGAGCAGTCGGAAATCTATCTCAAGCTATTCACTTCTTTAA 1632 0.3928 MGVEMTTNTFLPSFSSFTSGILRAMGSISNGADDGGSQSPVSPEEVENGGSQSSVFPEEADNEDNTRGGGGGGRGDGNLKKGTWTSAEDAILVEYVQKYGDRNWSAVQKKFGLARCGKSCRLRWTNHLRPDLRKGAFTAEEEKLLVEQHYILRNKWAQIALAFPGRTDNEIKNYWHTRSKRLKKAGLPIYPEEVVERAKNMNQEHLNVDVGADQGDDNNSQIENFEIPEVVFKSFKLRPEAIVLPPYLDMQGSGSVDQSIDSIYNILLGPPSKRARLEDTTFNALDNTTFNNNSDSYTVAIPIFDQCEKYCMLSPPSDTILCASNGYDDNLIIGSHAALNDNISPFESDGSMMNELNIDRHVALNDTVYSSEPIDGCTSNELPSIQYLQTQQCSLDTPVSRFPIHESVDTSIQFPPIEDPNQSVFVYPASGDLLNTRSLQDNSNDTNLQEGIEKSAPKSVAYDDICADWDESSAPLLYSDYYSIDISMFSIDEPYFKPFRKVFCIWSAKELLTNEAQRLSCLVLLLTFKKQSSRKSISSYSLL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01322 543 MobiDBLite consensus disorder prediction 28 59 - -
Car07g01322 543 MobiDBLite consensus disorder prediction 28 81 - -
Car07g01322 543 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 183 IPR017930 -
Car07g01322 543 CDD SANT 83 128 IPR001005 -
Car07g01322 543 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 132 IPR017930 -
Car07g01322 543 Gene3D - 80 133 - -
Car07g01322 543 SUPERFAMILY Homeodomain-like 78 175 IPR009057 -
Car07g01322 543 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 63 450 - -
Car07g01322 543 CDD SANT 136 177 IPR001005 -
Car07g01322 543 ProSiteProfiles Myb-like domain profile. 129 179 IPR001005 -
Car07g01322 543 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 63 450 - -
Car07g01322 543 SMART sant 133 181 IPR001005 -
Car07g01322 543 SMART sant 80 130 IPR001005 -
Car07g01322 543 ProSiteProfiles Myb-like domain profile. 76 128 IPR001005 -
Car07g01322 543 Pfam Myb-like DNA-binding domain 84 145 - -
Car07g01322 543 Gene3D - 135 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01322 Car-Chr7 12149849 12153415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01322 79 294 MYB Transcription Factor Family AT2G26960 45.217 2.79e-55 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car07g01322 Myb_DNA-bind_6 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01322 K09422 - cam:101495598 962.214