Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01321 ATGGTTTGTACTGCCAATGATTTACAACAATGGAAAGATTTTCCCAAAGGACTCAAGGTTCTTCTCCTTGAGGGAGACAACGCTTCTGCCGCCGAGACAAGAGCAAAGCTTGAGGCCATGGACTATAATGTTTCTACATTCTGTGATGAGAATGAAGCCTTGTCAGTGATTTCAAGTAGACCTGAAGGCTTTCATATAGCCATAGTGGAGGTGAGTTCAAGCAGTTGCGAGGGAGGTTTCAAATTTCTTGAGAATGCCAAGGACTTGCCAACTATTATGACTTCAAACAACCACTGTTTGAACACCATGATGAAGTGCATAGCGCTTGGGGCAGTTGAGTTCCTCAGCAAACCACTCTCTGAAGACAAGCTCAGAAATATCTGGCAGCATGTCGTTCACAAGGCATTCAATGCTGGTGTAAGTGCCCAGTCTGAATCGCTGAAACCTGTGAAGGAATCTGTAGTCTCCATCTTGCAGCTCCAAACCAACAATGAACAACACGAAAGTAGAGCCTCAATTGAGTTAGAGAAAGTATCGAGGTTTGGTGACAATGACCGTGAGCATTATCCCGCTCCTTCAACTCCGCAGTTGAAACAGGCGGAAAGATTACTAGATGACGGGGATTGTCAAGAGCAGACTAATTGCTCCACAGAAAAAGAAAGCGGGGAACATGATGGAGAATCTAAATTTATTGAAACTACTTGTGAAAATTTGAATGCTGAAAGTACTCCTCGACAAACGAAATCTGAAATTACTCTGGTTCATAAGGAAGAGGATTTTACAGATGCTTCTAAGTATGAGAGTGTTGTTTTTCGACATCCACAAAATTTGAAGGTTCTCAAAAATAGTGACAGTAATACAACATCTGCAAATAAAGTCGGTGTTCGTAATCATAAATGTGAGATAAAAGCTAATAGGAAGAAGATGAAAGTAGATTGGACGCCCGAGCTGCACAAAAAGTTTGTAAAGGCAGTGGAACAACTAGGCATTGATCACGCTATTCCTTCTCGAATATTGGATCTAATGAAAGTGGAAGGCTTGACAAGGCATAATGTAGCAAGCCATCTTCAGAAATATAGAATGCATAAAAGACATATCTTGCCGAAGCAAGAAGATCGGAAATGGCTAAATCAAAGAGATCCAATGCAAAGGAGTTATTGTCTTCAAAGGCCAATTATGCCAAGTCCACCATATTATCCTAACCATACTCTTCCAATAGCTCCTTTATATTCAATGTGGGGACAATCTAGAAATCAAACAGCTAGTATGCAGGTGTGGGGTCATTCTGGTTATCCTTTGTGGCAGCCTACAGAAAGTTGGCACTGGAAATCGTTTCCGGGGATGCATTCAGATACATGGGGCTGCCCGGTGCTACCGCCACCTCAACCTCCTAACTTTTCCTTCTCTCATAATATACATGTCTTGAGCAATGCTAATGCAGCAGATTACATGTTTGGCATGCCTAGTTCCTTTGACCATTATCCGGCAGAGGAGGTTGTTGACAAGGTTGTGAAGGAGGTAATAAGTAAGCCATGGCTACCTTTGCCTATAGGCCTCAAACCTCCTTCAACGGATAGCGTGTTGGCCGAGATATCAAGACAAGGCAGTTCAACCATCCCTCCAAGCAGCAATGGTTCTATTCCCAGTTGA 1650 0.4267 MVCTANDLQQWKDFPKGLKVLLLEGDNASAAETRAKLEAMDYNVSTFCDENEALSVISSRPEGFHIAIVEVSSSSCEGGFKFLENAKDLPTIMTSNNHCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFNAGVSAQSESLKPVKESVVSILQLQTNNEQHESRASIELEKVSRFGDNDREHYPAPSTPQLKQAERLLDDGDCQEQTNCSTEKESGEHDGESKFIETTCENLNAESTPRQTKSEITLVHKEEDFTDASKYESVVFRHPQNLKVLKNSDSNTTSANKVGVRNHKCEIKANRKKMKVDWTPELHKKFVKAVEQLGIDHAIPSRILDLMKVEGLTRHNVASHLQKYRMHKRHILPKQEDRKWLNQRDPMQRSYCLQRPIMPSPPYYPNHTLPIAPLYSMWGQSRNQTASMQVWGHSGYPLWQPTESWHWKSFPGMHSDTWGCPVLPPPQPPNFSFSHNIHVLSNANAADYMFGMPSSFDHYPAEEVVDKVVKEVISKPWLPLPIGLKPPSTDSVLAEISRQGSSTIPPSSNGSIPS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01321 549 Pfam Response regulator receiver domain 20 127 IPR001789 GO:0000160
Car07g01321 549 Pfam Myb-like DNA-binding domain 311 360 IPR001005 -
Car07g01321 549 MobiDBLite consensus disorder prediction 527 549 - -
Car07g01321 549 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 308 363 IPR006447 GO:0003677
Car07g01321 549 PANTHER TWO-COMPONENT RESPONSE REGULATOR-APRR2-LIKE PROTEIN 1 541 - -
Car07g01321 549 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 305 364 IPR017930 -
Car07g01321 549 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 541 IPR044825 GO:0003700|GO:0045893
Car07g01321 549 SUPERFAMILY Homeodomain-like 307 365 IPR009057 -
Car07g01321 549 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Car07g01321 549 Gene3D - 18 146 - -
Car07g01321 549 SUPERFAMILY CheY-like 16 134 IPR011006 -
Car07g01321 549 MobiDBLite consensus disorder prediction 526 549 - -
Car07g01321 549 Gene3D - 304 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01321 Car-Chr7 12138243 12144101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01321 1 546 Response Regulator Gene Family AT4G18020 48.877 1.15e-139 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Car07g01321 Response_reg 3.2e-07 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00365 08 2970230 2976227 Car07g01321 07 12138243 12144101 PCT