Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01302 ATGAAGTGTTTCTTCTTCAAAGAGAAATCCAAATCCGCTCCAGAATTGCAGAACCGAAATAAGAAGAAGAATCCTGCTGTGAACCGCGCAACAAACTCCACTGGCTCTGTATCTTCGCCTAAGAGTGTGAAGGATTTGTACAGAGAGAAAGAGAATAGTTTTAGAGTTTTCACTTTTCAAGAGCTGAGAGATGCTACCAATGGTTTCGATAGAATGTTCAAGATTGGTGAAGGGGGTTTTGGGAGTGTTTATAAAGGGTCCATTTTGCCCTCAGATGGACAGGGTGATCCAATTGTAGTTGCCATCAAAAGGCTTAACACTCGTGGCTTTCAGGGTCATAAAGAATGGCTAGCAGAAGTTCAATTTCTCGGCATTGTTAATCACCCAAATTTGGTTAAGCTTTTGGGATATTGCTCAGTAGACGGAGAAAGAGGAATCCAACGGCTGTTGGTGTATGAGTTCATGCCAAACAGAAGTTTGGAAACCCACCTTTTCGGTAAAACTTTGCCGACCCTTCCATGGAAAACAAGATTGGAGGTCATGCTTGGTGCTGCTGAAGGATTAGCTTATCTACATGAGGGACTCGAGATACAGGTGATCTACCGAGATTTCAAATCTTCAAACGTTCTATTGGATGAAAATTTCCACCCGAAGCTCTCAGATTTCGGTCTTGCAAGGGAAGGGCCACAAGGGGATCAGACTCATGTATCTACCGCGGTAGTTGGAACACAAGGATATGCTGCGCCAGAATACATCGAAACAGGTCATCTGAAAGTCCAGAGTGACATGTGGAGTTTTGGGGTCGTACTATACGAGATTCTCACAGGAAGGAGATCATTAGAAAGAAACCGTCCAACGGCTGAACAGAAGCTATTAGATTGGGTTAAAAATTATCCTGCTGATAGTAACCGATTCAGCATGATAATGGACCCGCGACTTAGGAACCAATATTCTATTGTTGCTGCGCGCAAAATAGCCAAGTTGGCTGATAGTTGCTTGAAGAAGAATCCAGAAGATAGACCATCTATGAGTCAGATAGTGGAAGGGTTGAAGCAAGCATTGCAATTTTCAGAAATAGCAAACACTTCTCATGATATTGCTGAATCTTCTAGGTCTAAATTGGTTCAGAAAGGTAAATAG 1140 0.4263 MKCFFFKEKSKSAPELQNRNKKKNPAVNRATNSTGSVSSPKSVKDLYREKENSFRVFTFQELRDATNGFDRMFKIGEGGFGSVYKGSILPSDGQGDPIVVAIKRLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLETHLFGKTLPTLPWKTRLEVMLGAAEGLAYLHEGLEIQVIYRDFKSSNVLLDENFHPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTAEQKLLDWVKNYPADSNRFSMIMDPRLRNQYSIVAARKIAKLADSCLKKNPEDRPSMSQIVEGLKQALQFSEIANTSHDIAESSRSKLVQKGK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01302 379 SUPERFAMILY Protein kinase-like (PK-like) 51 349 IPR011009 -
Car07g01302 379 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Car07g01302 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Car07g01302 379 MobiDBLite consensus disorder prediction 19 41 - -
Car07g01302 379 PANTHER OS01G0588500 PROTEIN-RELATED 14 376 - -
Car07g01302 379 MobiDBLite consensus disorder prediction 9 42 - -
Car07g01302 379 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01302 379 ProSitePatterns Protein kinases ATP-binding region signature. 75 103 IPR017441 GO:0005524
Car07g01302 379 Pfam Protein kinase domain 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01302 379 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 14 376 - -
Car07g01302 379 Gene3D Transferase(Phosphotransferase) domain 1 155 374 - -
Car07g01302 379 CDD STKc_IRAK 75 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01302 Car-Chr7 11910700 11913940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01302 3 350 Glycoside Hydrolase AT3G07070 43.017 1.15e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car07g01302 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01302 - K00924 gmx:100305403 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01302 07 11910700 11913940 Car07g01302 07 11910700 11913940 ECH