Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01283 ATGGGAAAACAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACACCACTTTGGCGTAATGGGCCACCTGAGAAGCCAATTTTGTGCAATGCATGTGGATCTCGATGGAGGACAAAGGGAACACTTGTGAATTATACCCCTTTACATGCTCGTTCAGAACCTCTTAATCATGAGGATCAAAGAGTTTCGAGGTTAAAGATCGTATCGTTAAATAAGAACAAAGATGTGAAATTGGTTAAGCGAAAGCAGAACCACGACAATGCTGCATCTGGAGAGCTCACCCCTGAATATGATCAAGGATTCCAAAAGGCTGTGGATGAGGATACAAGCAATAGATCAAGTTCAGGGTCAGCCATCTCTAATTCAGAAAGCTGTGTTCAATTCGGTGGCGCAGATGCTAGTGATTTGACAGGTCCTTCTCAGTCAGTGGTCTGGGATACTGTGGTGCCTTCCAAAAAGAGGACGTGTGCAGGTCGTATGAAGAATTCTTCTGTTGAGAAGCTCACAAAAGACTTGTGTACTATTCTTCATGAACAACAACAGTCTTGTTTTTCTGCTTCTTCAGAAGAGGATCTTCTTTATGAAAGTGAAACGCCGATGGTCTCTGTTGAGATAGGACATGGAAGCATGCTCATTAGGCATCCAAGCTCTATAGCTCGTGACGAAGAGTCTGAGGCTAGCTCTCTTTCGGTTGATAATAAACAATGCCTACTCAATGAGGCGTATTCATGTTATGGTTCGATTCCCATGTTCAGTGATTGTGGTGGCATGAATTTCTCTTCTCAGGGAGTTGGAAAGGTCAGGAACTCTGCAACTGGCCAAAGAATGCAACAGGAGCAACTCAAAAGGGACAAGTCTCAACTTGAAAAACTAGAAGTTCTTGGAAATCATGATTCACCACTGTGCTTAATAGATTTAAATGATGTTGTGAACTATGAGGAGTTTTCAAGAAACTTGACATACGAAGAGCAGCAGCAATTACTGAAGTATCTCCCTGTGGTTGATACCGCTAAACTTCCTGACAGCCTTAAAATTATGTTCGATAGCTTTCAGTTCAAGGAGGACTTAACTTATTTTCAGAAACTTCTCGGGGAAGGTGTCCTCGATTTCTCTTTGTTGGAGGCAAACTTGGAAGAGTGCAAAACGTTGAAAAGGCTTGCATTATCTAATCTGTCGAAGTCAAAATGGGTTGAACACTATAATTCTCTCAAGAGAGCTGGAAAATGTAATGATATGGAATCTCCTGCTGTGGCATCAAGTAATGTTGCCAATGTTAAGAGATTGCGCGTCAGCCAAAATCAAAATTTAACAGAATCAAAGACAACAATGAGGAGCCCCAAAAGGGTGATCATAAAAGCTGGATTTGGGGGAAAAGAAGTTGTAGACGGCTCTAGCATCAGCCCGCAACGCCTATTTGCATTGCCTCGCAATGGCGGCTTGCACATGCTGGATTCTTCAAACTTTGTCGACGAGAGTTCTGATCAGGATCTGCTGCTAGAGTTTCCGTCTAACAATTCTTTTCCACAGGCAGAGCTCCTGCTCCCGACTTCTAGCTTGGTTCCTCAACACAGCACCAGTAGTAGCTCGGTATACTCGCATGTTACTCGTCCTTGA 1614 0.4331 MGKQGPCYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHARSEPLNHEDQRVSRLKIVSLNKNKDVKLVKRKQNHDNAASGELTPEYDQGFQKAVDEDTSNRSSSGSAISNSESCVQFGGADASDLTGPSQSVVWDTVVPSKKRTCAGRMKNSSVEKLTKDLCTILHEQQQSCFSASSEEDLLYESETPMVSVEIGHGSMLIRHPSSIARDEESEASSLSVDNKQCLLNEAYSCYGSIPMFSDCGGMNFSSQGVGKVRNSATGQRMQQEQLKRDKSQLEKLEVLGNHDSPLCLIDLNDVVNYEEFSRNLTYEEQQQLLKYLPVVDTAKLPDSLKIMFDSFQFKEDLTYFQKLLGEGVLDFSLLEANLEECKTLKRLALSNLSKSKWVEHYNSLKRAGKCNDMESPAVASSNVANVKRLRVSQNQNLTESKTTMRSPKRVIIKAGFGGKEVVDGSSISPQRLFALPRNGGLHMLDSSNFVDESSDQDLLLEFPSNNSFPQAELLLPTSSLVPQHSTSSSSVYSHVTRP 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01283 537 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Car07g01283 537 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 297 409 IPR044867 -
Car07g01283 537 CDD ZnF_GATA 6 54 IPR000679 GO:0006355|GO:0043565
Car07g01283 537 MobiDBLite consensus disorder prediction 518 537 - -
Car07g01283 537 PANTHER OSJNBB0038F03.10 PROTEIN 1 537 IPR044589 -
Car07g01283 537 Gene3D - 3 88 IPR013088 GO:0006355|GO:0008270
Car07g01283 537 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 46 - -
Car07g01283 537 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Car07g01283 537 PANTHER GATA TRANSCRIPTION FACTOR-LIKE PROTEIN 1 537 - -
Car07g01283 537 MobiDBLite consensus disorder prediction 79 98 - -
Car07g01283 537 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Car07g01283 537 Pfam Asx homology domain 285 372 IPR028020 -
Car07g01283 537 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01283 Car-Chr7 11703193 11709116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01283 1 513 C2C2-Gata Transcription Factor Family AT4G17570 53.296 2.40e-155 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Car07g01283 ASXH 5.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01283 - - gmx:100799745 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00338 08 2657333 2662948 Car07g01283 07 11703193 11709116 PCT