Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01275 ATGAAAAGTAACCACACAACCACATCTTCACAGCGACGCAACATACCTATTTCATTTTGTCAAAGCACTCGAAAGAAGAACATTTTCTCAGTCTGTTTAGTCGAGAAGATGGCTTACAATTTTAGACATCGCAGTCAAAGAGTGAGGTATGAAGAAACAAGAGATGGTGAAAGTGATTCAAACAGTTCTGATCTTGAATACTCAACATTAATAGAAACTCCGagaggaaatggtcgtggaagaggaagaggaagaggaagaaggattaataggcaaagggagagggagCATTCTCTCAAAAGAAGACAAGACAATGTTACAAGGTGGGCTAACCGAGGCGGGCGTAGCCACCGAATAGCTCGTAGAAATATTGTACTAGACAGTGAAGAAAGTAATGAAAGAAATAATAATTTGGAGATGGAAACAGCTCCATCATCCATTAATCAAGAACCGTTACCAACTACAACATCAGGAATATCATCTTCTCAAAAAGCTAGACGAACTAAAAAAACAATATTATCATGGTTGACGGATTGTAGAAAAGTTGAGGACGGGGATTTAGTGAACTATCTCACAGAGAGAAGTGGGCCGGTGACCGGCCGAATAAATAATGGTGCAATAATGTGCAACTGTTGCGACAAAGAAGTTTCTGTTTGGAACTTCGAGAGACATAATAAAAGTGATAGGAAACAACCCTACAAACACATTCAAGTGTACAGGGACCCCGAATTATGCTCCCTCCAAGAGTCCCTCATTGGTGCTTGGCAAAAAGATGAAGAACAAAAACGCCGCGCCATGTTCACGTATGTTCCCAAAAATATTAACGTTGAAGAGCCTGTTTGTTTAATTTGTGGAAACGGAGGAGAAGGAGAATATATATGCTGTCACAACTGCCCCTCAGTTTATCATACTTCTTGTGTCAATATGGAGGGTGTCCCCTACAAAAATTGGTTATGTCATTATTGCATATGCAAATACTGTGGGGTCGGTGGAGTTAGTCAGCATTTAAGCACGTGCTGCCAATGCAATAAGAAGTTTCATTGGGCGTGCTTACAGTTACAGGATCGTAATTGTCCATCATTATACTGTGGGCCAAGTTGCAAAGAGATATATGAGAAATTGGAGGGGTTACTTGGAATCCAAAATGATATTGATGAGAGGTATTCTTGGAGAGTTGTCCATAAAGTGGATACGATCCCTGGGGTGGTTCCCGTTGATGAGAATCTTCGTATGGAAATCAATGCAAAAGTTGCAGTTACTTGGATGTTGATGAATGAAGTTTTTGAAACAATAATAGACCAACAAACAGGCATCAATGTTGTACAAAGTGTTGTTTATAGCTGTGGATCAAACTTAAGGAGGGTTAATTTTAGCCGGTTTTACACATTTGTGATAGAGAAAGATGATGAGATGATTGGTGCTGCTTCTATCAGGTTCCATGGGAAAGAGATTGTAGAAATGCCTTTTATTGCAACGGATGAGGCGTACAGAGGCAAAGGAATTTGCCGATTACTAATGGGGATAATTGAATCGTTCATGTGTGACCTCAAAGTTAAAAACTTGATCATTCCTTCTAATGTTGAGACAACTGAAATGTGGAAGGTGAAGTATAACTTTGATGTGGTTAACAACAAAGTGTTAAAGAAAAACATATCTTCATATAACATGTTGATGTTCCCCAGAGCTATACGATTATACAAGGACTTTTTCAATAGAAAACTTGTAGACATGAATGCAGAGCCTGATCAGGAGATATAG 1758 0.3754 MKSNHTTTSSQRRNIPISFCQSTRKKNIFSVCLVEKMAYNFRHRSQRVRYEETRDGESDSNSSDLEYSTLIETPRGNGRGRGRGRGRRINRQREREHSLKRRQDNVTRWANRGGRSHRIARRNIVLDSEESNERNNNLEMETAPSSINQEPLPTTTSGISSSQKARRTKKTILSWLTDCRKVEDGDLVNYLTERSGPVTGRINNGAIMCNCCDKEVSVWNFERHNKSDRKQPYKHIQVYRDPELCSLQESLIGAWQKDEEQKRRAMFTYVPKNINVEEPVCLICGNGGEGEYICCHNCPSVYHTSCVNMEGVPYKNWLCHYCICKYCGVGGVSQHLSTCCQCNKKFHWACLQLQDRNCPSLYCGPSCKEIYEKLEGLLGIQNDIDERYSWRVVHKVDTIPGVVPVDENLRMEINAKVAVTWMLMNEVFETIIDQQTGINVVQSVVYSCGSNLRRVNFSRFYTFVIEKDDEMIGAASIRFHGKEIVEMPFIATDEAYRGKGICRLLMGIIESFMCDLKVKNLIIPSNVETTEMWKVKYNFDVVNNKVLKKNISSYNMLMFPRAIRLYKDFFNRKLVDMNAEPDQEI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01275 585 MobiDBLite consensus disorder prediction 89 108 - -
Car07g01275 585 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 452 527 IPR016181 -
Car07g01275 585 Pfam Acetyltransferase (GNAT) family 461 534 IPR000182 GO:0016407
Car07g01275 585 MobiDBLite consensus disorder prediction 120 136 - -
Car07g01275 585 Gene3D - 443 558 - -
Car07g01275 585 ProSiteProfiles Zinc finger PHD-type profile. 278 325 IPR019787 -
Car07g01275 585 ProSitePatterns Zinc finger PHD-type signature. 281 322 IPR019786 -
Car07g01275 585 MobiDBLite consensus disorder prediction 49 165 - -
Car07g01275 585 PANTHER GNAT FAMILY ACETYLTRANSFERASE 111 578 - -
Car07g01275 585 SMART PHD_3 280 323 IPR001965 -
Car07g01275 585 CDD NAT_SF 463 523 - -
Car07g01275 585 Pfam Tify domain binding domain 200 238 IPR032308 -
Car07g01275 585 MobiDBLite consensus disorder prediction 137 165 - -
Car07g01275 585 PANTHER PHD FINGER PROTEIN 12 111 578 IPR042163 GO:0003714|GO:0045892
Car07g01275 585 SUPERFAMILY FYVE/PHD zinc finger 260 323 IPR011011 -
Car07g01275 585 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 338 IPR013083 -
Car07g01275 585 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 422 585 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01275 Car-Chr7 11615031 11620167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01275 169 571 PHD Transcription Factor Family AT1G05380 35.731 9.75e-86 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01275 - - cam:101493361 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01275 07 11615031 11620167 Car07g01275 07 11615031 11620167 ECH