Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01271 ATGGATAACGCTGCTGAAGTTTCAGCTCTTAGAAGCATCAAATTGCATCTTTTAGGTGAACTATCCCCTTTAGGAACTCCAATTGCACAATACACTCAAACCAAACAACCCTGGTCtgaatctgaatctgaatttgaatttgaatttgaatttCAAGGAGTAACAAATAACAACACAACCTCTCAAACCGAATCAAACTCATCAACTTCCGATTCTTCAATCTCTTTAGATCATTACTTCACTAACCTCCTTCAAACGGAAACACAAATTCCACTTTTCGAATTTGATTCCAAATTGCGAACAATCGAACAGGAGAGTCCCAAAGCGTTAATAACTGAACCTGTTAACAACCGTACTCAACGAACCATAGAGAAAAACTCTTCACTGAGCCGAAAACCGTCGCTGAAAATCTCTCTCCCCAAGAAAACCGAGTGGATCAAATTCGGAAACTCGGATCCGAAACCGGAGGTGATTGTTCAGAAACCAGAACCGGAACCTGTTGAGAAAAAGCACTACAGAGGAGTTAGACAAAGACCGTGGGGAAAATTCGCCGCCGAGATTCGCGATCCGAACAAACGCGGCTCAAGAGTTTGGCTCGGAACGTTTGATACGGCTATTGAAGCCGCTAAAGCCTACGATCGAGCCGCTTTCAGGCTTCGCGGATCCAAAGCAATTCTTAACTTTCCACTTGAAGTCAACGAAGTTATTGCGGCGGTGGAGGAGACTTCCGGCGACGGTGAGAGGAAACGTTGCCGTGAAGAGGAAGAGGTGGAGGAGAAACCGGTGGTTAAAAAGGAGAAAACGATGGAGTTTGATGTGAACTGTTTTAAAGATATGCCGTTAACGCCGTCAACTTGGACTGGGTTTTGGGACGGTGATATTAAGGGAATTTTCAGTGTTCCACCGTTGTCGCCGTTATCTTCTTTTTGTTATTCACCTTTAGTGGCTGTGTGA 954 0.4319 MDNAAEVSALRSIKLHLLGELSPLGTPIAQYTQTKQPWSESESEFEFEFEFQGVTNNNTTSQTESNSSTSDSSISLDHYFTNLLQTETQIPLFEFDSKLRTIEQESPKALITEPVNNRTQRTIEKNSSLSRKPSLKISLPKKTEWIKFGNSDPKPEVIVQKPEPEPVEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEVNEVIAAVEETSGDGERKRCREEEEVEEKPVVKKEKTMEFDVNCFKDMPLTPSTWTGFWDGDIKGIFSVPPLSPLSSFCYSPLVAV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01271 317 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 304 - -
Car07g01271 317 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 5 304 - -
Car07g01271 317 CDD AP2 170 229 IPR001471 GO:0003700|GO:0006355
Car07g01271 317 SMART rav1_2 171 235 IPR001471 GO:0003700|GO:0006355
Car07g01271 317 Pfam AP2 domain 171 221 IPR001471 GO:0003700|GO:0006355
Car07g01271 317 PRINTS Ethylene responsive element binding protein signature 172 183 IPR001471 GO:0003700|GO:0006355
Car07g01271 317 PRINTS Ethylene responsive element binding protein signature 211 231 IPR001471 GO:0003700|GO:0006355
Car07g01271 317 SUPERFAMILY DNA-binding domain 171 231 IPR016177 GO:0003677
Car07g01271 317 ProSiteProfiles AP2/ERF domain profile. 171 229 IPR001471 GO:0003700|GO:0006355
Car07g01271 317 Gene3D AP2/ERF domain 170 231 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01271 Car-Chr7 11568527 11570147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01271 1 317 AP2-EREBP Transcription Factor Family AT5G47230 47.879 5.21e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car07g01271 AP2 7.1e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01271 K09286 - gmx:100800453 323.168