Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01268 ATGCATATTGAGGAATTGAAGGGAGGTGAGGTTGGAGAAGGTGGTGAGGAAGGGAGATGGAGCTTGGTTGGTTTGGATACAAAAAGGGTTTTGGTTGGAGCAGGTGCTAGAGCGCTGTTTTATCCTACGCTTGTTTATAATGTTGTTAGGAATAGGCTTCAGGCTGAGTTTCGATGGTGGGATAAAGTTGACGAGTTCATATTGTTAGGTGCTGTTCCATTTCCTATTGATGTTCCTCGCTTGAAGGATCTTGGTGTTCGCGGGGTCATTACATTGAATGAGTCATATGAGACTTTGGTTCCAACCAAATTATATTATactcatggcattgatcatctggTGATTCCTACCAGAGATTATTGTTTTGCTCCATCATTACATAACATACGCCGTGCTGTTGACTTCATACACGAAAATGCATTGTCTGGACGTACTACATATGTCCACTGCAAAGCAGGACGGGGTCGCAGCACAACTGTTGTTATTTGTTATCTGGTGCACCACAAACTGATGTCCCCTGATGCTGCATATGAATATGTTAAGTCAATTCGGCCAAGGGTGCTTCTAGCTTCCTCTCAGTGGCAAGCTGTCCTGGATTACTACCGCCACCTTATTATGAGGAGGGCTATTGGATTTGCACCTGGAGCTGATCTATTTGTAAAGGCTTCTGGGGTTGTTGCAGCAGCTTCACGAGATCTTGTCAAGTTTGATGACAATTCTGTAGTTGTGGTAACAGAGCAAGATCTTGAGGGATATGACCCAAGTTGTGAATCAGGAGCCATGGCAAGTGAAATATGGGCAGACTTAAGCGTTGTTTACCGTGTGCGAGTTGCTGGACAGGCAGCATTGGCAAGAATATCATGCCTTTGGTTGCGATATGGTACCACTGACCAGAAGATTTCTGCGGAAAACTTGAGCAGGGAAAGCAATTGCTCAATCAGAAGTAATCACTTGGGAGGAATAAGTGTTGATATTCACGTGTACTGA 987 0.4326 MHIEELKGGEVGEGGEEGRWSLVGLDTKRVLVGAGARALFYPTLVYNVVRNRLQAEFRWWDKVDEFILLGAVPFPIDVPRLKDLGVRGVITLNESYETLVPTKLYYTHGIDHLVIPTRDYCFAPSLHNIRRAVDFIHENALSGRTTYVHCKAGRGRSTTVVICYLVHHKLMSPDAAYEYVKSIRPRVLLASSQWQAVLDYYRHLIMRRAIGFAPGADLFVKASGVVAAASRDLVKFDDNSVVVVTEQDLEGYDPSCESGAMASEIWADLSVVYRVRVAGQAALARISCLWLRYGTTDQKISAENLSRESNCSIRSNHLGGISVDIHVY 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01268 328 CDD PTPMT1 59 203 IPR044596 GO:0004721
Car07g01268 328 PANTHER - 1 328 - -
Car07g01268 328 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Car07g01268 328 Gene3D Protein tyrosine phosphatase superfamily 59 209 IPR029021 -
Car07g01268 328 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 328 - -
Car07g01268 328 SMART ptp_7 101 206 IPR003595 -
Car07g01268 328 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Car07g01268 328 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Car07g01268 328 Pfam Dual specificity phosphatase, catalytic domain 89 202 IPR000340 GO:0008138|GO:0016311
Car07g01268 328 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Car07g01268 328 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 51 205 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01268 Car-Chr7 11539230 11544225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01268 18 328 Protein tyrosine phosphatase (PTP) family AT2G35680 60.502 1.95e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01268 - - gmx:100790413 548.51