Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01263 ATGACCCGACGTTGCTCCCATTGTAGCCACAATGGGCACAACTCACGAACATGTCCGAACCGCGGTGTTAAGCTATTCGGAGTCCGATTAACCGACGGGTCGATCCGGAAAAGTGCTAGTATGGGTAATCTTAGTCACTATACCGGTTCCGGGTCTGGACCGCTTCATACCGGGTTAAATAACCCGGGTTCACCCGGTGAAAACCCTGATCACGCTGCTGCGGCTGACGGTTACGCTTCTGAGGATTTTGTTGCTGGTTCATCTTCTACTTCACGTGAAAGAAAAAAGGGCATTCCGTGGACTGAGGAGGAACATAGAATGTTTTTACTCGGATTGCAGAAGCTGGGCAAAGGTGATTGGCGTGGAATTGCTAGGAACTATGTTATATCAAGGACACCGACTCAAGTGGCCAGTCATGCTCAGAAATATTTCATTAGGCAAAGCAACATATCTAGACGAAAAAGACGCTCCAGCTTGTTTGATATTGTTGCAGATGAATCAGCGGACGCCTCAATGGTACCACAAGACTTCTTATCAGCTAATCAGCCACAGACTGAAACAGAAGGCAACAACCCTTTGCCCGCCCCTCCCCCGCTTGACGAAGAATGTGAGTCCATGGATTCCACAAACTCAAACGATGGAGATTCTGCCCCATTAAAGCCTGATAGCAGCAGCACACAAGCATCGTCTTTCCCAGTAGTATATCCGGCATACTATTCTCCATTCTTCCCTTTTCCTCTTCCCTATTGGTCTGGATACAGTCCGGAGCCGGCTCTTAAGAACGAGACGCATGAAATCTTGAAGCCAACCGCAGTACACTCCAAGAGCCCTATCAATGTTGATGAACTGGTTGGCATGTCAAAACTGAGTTTAGGAGAAACTATAGGCGACGCCGGCCCCTCGACTCTATCTCGTAAACTACTCGAAGAAGGACCTTCACGACAGTCGGCTTTTCAAGCAACTCCAGCATGTGGGAGTTCAGATGTGAATGGAAATGCCATCCATGCAGTTTGA 1014 0.4842 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYTGSGSGPLHTGLNNPGSPGENPDHAAAADGYASEDFVAGSSSTSRERKKGIPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNISRRKRRSSLFDIVADESADASMVPQDFLSANQPQTETEGNNPLPAPPPLDEECESMDSTNSNDGDSAPLKPDSSSTQASSFPVVYPAYYSPFFPFPLPYWSGYSPEPALKNETHEILKPTAVHSKSPINVDELVGMSKLSLGETIGDAGPSTLSRKLLEEGPSRQSAFQATPACGSSDVNGNAIHAV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01263 337 SMART sant 96 146 IPR001005 -
Car07g01263 337 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
Car07g01263 337 MobiDBLite consensus disorder prediction 209 227 - -
Car07g01263 337 MobiDBLite consensus disorder prediction 37 74 - -
Car07g01263 337 CDD SANT 99 144 IPR001005 -
Car07g01263 337 MobiDBLite consensus disorder prediction 37 64 - -
Car07g01263 337 PANTHER BNAC01G21010D PROTEIN 1 333 - -
Car07g01263 337 ProSiteProfiles SANT domain profile. 100 148 IPR017884 -
Car07g01263 337 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Car07g01263 337 MobiDBLite consensus disorder prediction 1 21 - -
Car07g01263 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Car07g01263 337 Gene3D - 98 150 - -
Car07g01263 337 MobiDBLite consensus disorder prediction 181 227 - -
Car07g01263 337 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
Car07g01263 337 PANTHER TRANSCRIPTION FACTOR KUA1 1 333 - -
Car07g01263 337 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 95 147 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01263 Car-Chr7 11470229 11473861 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car07g01263 Myb_DNA-binding 2.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01263 - - cam:101491712 663.685