Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01261 ATGGATTTGGAAGATTTTGTCCTTATTCACACTCACGAACTTCAATCAACTACCTCTATTATTGCCTCAACTTCTAATTCATCCTCAGAAGAAGAAGCCACTACCACTAAGAAGAAAACTCAACATGTCAAAGAATTAAGCAATAGTAGCATCaaagaaaagaaaaagaaaaaaatgaaTAATAATGATATTGATGGGAAGCATCCAACATATAGAGGAGTAAGAATGCGTCAATGGGGCAAATGGGTGTCAGAAATTAGAGAGCCAAGAAAAAAATCAAGAATTTGGCTTGGAACTTTTCCAACTCCAGATATGGCGGCTCGAGCTCATGACGTGGCGGCTCTTGCTATCAAAGGCTCTTCGGCTTACCTTAATTTCCCCGAATTAGCCGCTATGTTGCCGCGTCCAGCTAGTACTTCTCCTAAGGACATCCAAGCCGCCGCCGCCAAAGCAGCCGCAACTTTTTATAATCATCCAACTCGTCAACTTCAATTGGAAGCTGAAGCCGAGCCGAGCCAAGCCTCGTCTTCTTCAAGCCACAATGAACGATCATCGTTGAATGGTGAGGATGACATGTTCTTGAACCTTCCTGATCTTTCACTTGATTATTCTTCATCGGCTTGGCTTGTAACTGGAGCTCAACATATAGACTCGGCTTTCCGGCTTGAAGACTCTTTTCTATGGGACTCGTGTTAA 696 0.421 MDLEDFVLIHTHELQSTTSIIASTSNSSSEEEATTTKKKTQHVKELSNSSIKEKKKKKMNNNDIDGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALAIKGSSAYLNFPELAAMLPRPASTSPKDIQAAAAKAAATFYNHPTRQLQLEAEAEPSQASSSSSHNERSSLNGEDDMFLNLPDLSLDYSSSAWLVTGAQHIDSAFRLEDSFLWDSC 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01261 231 Gene3D AP2/ERF domain 70 128 IPR036955 GO:0003700|GO:0006355
Car07g01261 231 SMART rav1_2 70 133 IPR001471 GO:0003700|GO:0006355
Car07g01261 231 MobiDBLite consensus disorder prediction 32 70 - -
Car07g01261 231 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 17 208 - -
Car07g01261 231 MobiDBLite consensus disorder prediction 165 187 - -
Car07g01261 231 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 208 - -
Car07g01261 231 SUPERFAMILY DNA-binding domain 70 128 IPR016177 GO:0003677
Car07g01261 231 MobiDBLite consensus disorder prediction 22 70 - -
Car07g01261 231 MobiDBLite consensus disorder prediction 165 183 - -
Car07g01261 231 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Car07g01261 231 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Car07g01261 231 ProSiteProfiles AP2/ERF domain profile. 70 127 IPR001471 GO:0003700|GO:0006355
Car07g01261 231 CDD AP2 71 129 IPR001471 GO:0003700|GO:0006355
Car07g01261 231 Pfam AP2 domain 69 119 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01261 Car-Chr7 11443952 11444867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01261 55 227 AP2-EREBP Transcription Factor Family AT2G44940 48.113 5.58e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car07g01261 AP2 6.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01261 - - mtr:MTR_4g100650 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00317 08 2520456 2520992 Car07g01261 07 11443952 11444867 PCT