Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01247 ATGGCTTCGAATCCTCCATTTCATGTGGAGGATCAGACGGATGAGGATTTTTTTGATAAATTGGTTGAGGATGATGTGGGACCCCTTAAGTCTGAAGGCAATGATGAAGGTAATGATTCTGGTGACGTCGAATCGTTTGCGAATTCaagtggtggaggaagtggggttgaggtgaaagaggaagaggaagaggaagaATGTGGTGTGAAATTGGATGGTAGAAATGCACAAGAGGGGAGTTTTTTGGTGTCTTCTAGTTCATCAGGTACGACGGATCACGGTGATCATGGGATGGAATCGGGGAATTTGTCGGGTTCGAGTGCAGACAAGAGCACTGGAATCCCTAGTTCAGATGTTAAGGAGGTTGATTGGAATTCATTTAATGCTGCTGAATCAAATGGAGGTGTTGGGTTTGGATCTTATTCTGACTTTTTCAATGAGTGTAATACTGAGGTAAAACCTGCTAATGAAATTTCGGGAGATCAATATGGGCAAGAATATCATCATGAGTCTAGTACTGAGATGAAATCTGGTAATGAAATTTTGAATGATGGTTTGAATGCTTCGGTTGATTATGCACATTATCAAGAAGGTCAAGATTATGATGCATTTGTGGGAAATAACACAGGTGGGAATGACCCAAATAGCAGTGAGTATTGGGAGAGTCTTTATCCTGGCTGGAAGTATGATCACAATACCGGGCAATGGTATCAAGTAGATGACCAGAATGCAACAACAACTTCTCAGGGAAGCTCAGAAGTCAATAATGCTATGGGTTGGATAGCTGCTTCTGATGCCAAAGCAGAGGTCTCTTATATGCAACAAAATGCTCAGTCTGTTGTTGCTGGAAATTTAGCTGAATTCGGTACAACTGAAACGGTACCAAGCTGGAATCATGTGTCACAAGGGAATAATGGGTATCCAGAACACATGGTTTTTGATCCCCAGTACCCTGGTTGGTATTATGACACAATTGCCCAAGAATGGCGCTTGTTAGAGACTTACAATTCATTGGTTCAATCTTCTGATCAGAGACTTGAAAATGGACGTGTGTCTACTAGTACTTTTTCTCATAATGATAACAATTTGTATAAAGATTATGGTCAAGCCGGCTATTATGAGTCGCAGGGTGTTGGTGGCCAGGCTACAGTTGACAATTGGAGTGGTTCATATGGTAGTAACCATCAGCAGGGTTTGGAAACACACACAACTGGCACTGCTACTAAAACTGGGGGTAGTGCAACTTATGGTGGAAACCGGCAGTTTGATCATTCTTTTGGTTCTAGTATTTCTGCAAACAAAGAACAACCAAATTCATCTAGCTCCTTTGGATCTGTTCCATTGTACAATAAAAATAACCATGGTCATGGTTTGGCTAATGGAACTGTTGAACAACAACGCTTTGCCCCTAGTGGGAACTTTGTTCAACATTTTAATTATTCCAATACACAGTTTGATGAGCAAAAAAATTTCTCAAATGATTATGCTGAAAATCACCAGCCCTTCAGTTACTCTAGTCAATCATTTCACGGTGGACATCAGCATTCTCATGCCCCTCATGTTGGAAGATCATCCATTGGGCGTCCTCCTCATGCTTTGGTAACATTTGGATTTGGTGGAAAACTCATTATAATGAAAGATTATAGTGATTTAAGCTCAACATATGGAAGTCAGAGTGTTGTACAAGGCTCTGTTTCTGTGTTAAACTTGATGGAAGTTGTATCACAAAGTATTGCTTCTTCCAGTATTGGAAATGGTGCCGGTGATTATTTTCGTGCCCTGGGCCAGCAATCTATCCCAGGTCCGTTGGTTGGTGGGAGTGTTGGAAATAAAGAGTTGAACAAATGGATAGACGAGAAGATTGCATATTGTGGATCCCCTGACATGGATTATAAGAAAAGTGAAAGGATGAGACTCCTTCTCTCTTTGCTTAAAATAGGTTGTCAACATTATGGAAAACTACGTTCTCCTTTTGGTACAGACAATATACTAAAAGAAAATGATACTCCTGAGTCAGCAGTTGCCAAGCTTTTTGCATCTGCCAAGATGAGTGGTAAGGAGTATGGTGTACTGAGCCACTGCCTGCAAAATTTGCCATCTGAAGCACAAATGCGGGCAACGGCTTCTGAGGTACAAAATCTTCTCGTCTCTGGCAAAAAGAAGGAAGCTTTGCAATACGCACAAGAAGGTCAATTGTGGGGACCTGCACTTGTTCTTGCTTCACAACTTGGTGAAAAGTTCTATGTTGATACAGTGAAGCAAATGGCACTTCGTCAACTGGTTGCAGGGTCTCCCTTGCGCACATTATGCCTTCTAATTGCTGGGCAACCAGCAGAAGTTTTCTCTTCTGACAGCTCAAATAGTGGGGACCCTAGTGCTTTTAATATGCCTCAACAACCTGCACAGTTTGGATCTAATGGCATGCTCGATGATTGGGAGGAGAATTTGGCTGTAATAACTGCAAACAGAACAAAAGGTGACGAGCTTGTAATTATTCACCTTGGTGATTGTTTGTGGAAGGAAAGAAGTGAGATCACTGCTGCACACATATGCTATTTGGTTGCTGAAGCAAACTTTGAGTCATACTCAGACAGTGCAAGGCTTTGTCTAATAGGTGCGGATCACTGGAAATTTCCTCGAACTTATGCTAGTCCAAAGGCTATCCAGAGGACTGAGTTATACGAATATTCAAAGGTGCTCGGAAACTCACAGTTTATTTTGCTTCCTTTTCAACCATATAAACTTATATATGCATATATGCTAGCTGAAGTGGGAAAGGTTTCAGACTCACTGAAGTACTGCCAAGCAGTGCTGAAATCCTTAAAAACTGGTCGCGCACCAGAAGTTGAAACATGGAAACAACTTCTATCCTCTCTTGAGGAGAGGATTAAAACCCACCAACAGGGTGGGTATGCTGCAAATTTGGCTCCTGGAAAATTAGTGGGAAAATTGCTGAACTTTTTTGATAGTACTGCACATCGAGTAGTTGGGGGTGGTTTACCACCACATGCTCCATCATCATCACAAGGAAACGTCAATGGAAATGAACATCAGCCCATGGCACATAGAGTGTCCAATAGCCAATCAACAATGGCCATGTCATCCTTAGTTCCATCTGATTCAATGGAACCCATCAGTGAGTGGACAACTGACAATAATAGAATGTCAAAACCTAATAGAAGTGTTTCCGAGCCAGACTTTGGTAGAAGCCCTCGACAGGAAACCTCGCATGGTGCACAAGGAAAAGCGTCAGAGGGCACATCACGCTTTTCTCGTTTTAGTTTTGGTTCACAACTTCTGCAAAAGACAATGGGACTAGTCTTGAAACCTCGTCCTGGCAAACAGGCAAAATTGGGTGAAAAGAACAAGTTCTATTATGATGAACACCTCAAAAGATGGGTAGAGGAAGGTGCTGAACCTCCAGCTGAAGAAACTGCACTGCCACCACCTCCAACAACTGCAACTTTCCAGAATGGTCTAACTGAATACAACTTGAAATCTGCATCGAAGACAGAAGGACCACCTTCAAAAGGGGGCTCTGATTTAAAAAATTCAAATCCTGAACATACTCCAGGGATCCCACCTATACCACCTGGCACAAATCATTTCGCCACTCGTGGCCGTGTTGGTGTTCGATCAAGGTACGTTGACACCTTCAACCAAGGTGGAGGAAGCTCTGCAAACCTATTTCAGTCACCATCTGTTCCATCTGCCAAACCTGCTCTTGCTGTCAAGGCCAAGTTTTTTATTCCTGCTCCCGCACCATCATCAAATGAGCAGACAATGGAGGCTATAGAAGAAAACAATCTAGAAGATAATTTAGCTAATGAATATCCCTCAACATCATATAGGAATGATGGGTCATTCCAATCCCCCAAACCAGCAACACCATTGGTCAGACACCCAAGTATGGGCAACGTCTCAAACTATGGAGCAGTAATGAATGGCAGTAACTGTAGTTCTCCTCACTCACGGCGGACAGCTTCATGGGGTGGGAGTATTGGTGATTCATTTAGTCCCACTAAATTGCGTGAAATTATGCCACTGGGGGAAGCTTTGGGAATGCCGCCATCAATGTATATGTCTGATGACGTTTCTATGGTGGGAACACATATGAGGAGTGGGAGTGTTGGAGAAGATCTTCACGAGGTGAAGTTCATGAAGAAGGAAAAGATACCTTACCCGGCAACCTTTTTCCCCACCCCTTGTTTTGCTTTAAATGCCAAGAGAGTTGGTACTGGCCGCCATCTAAGGCTCAAGCCGCTGCAACTTAACCGAACAAAGCGAAACCAATCGAAGAAAGAGAATCACAAATTTTTCTTTGCAATGGgtaaggttcatggatctcttgcacgtgctggaaaagtgagaggacaaactcccaaagttgctaagcaagacaaaaagaagaagccacgtggacgcgctcacaagCGTATGCAATACAATCGCCGTTTCGTCACCGCCGTTGTGGGATTCGGAAAGAAGCGTGGACCTAACTCATCTGAGAAGTGA 4515 0.4133 MASNPPFHVEDQTDEDFFDKLVEDDVGPLKSEGNDEGNDSGDVESFANSSGGGSGVEVKEEEEEEECGVKLDGRNAQEGSFLVSSSSSGTTDHGDHGMESGNLSGSSADKSTGIPSSDVKEVDWNSFNAAESNGGVGFGSYSDFFNECNTEVKPANEISGDQYGQEYHHESSTEMKSGNEILNDGLNASVDYAHYQEGQDYDAFVGNNTGGNDPNSSEYWESLYPGWKYDHNTGQWYQVDDQNATTTSQGSSEVNNAMGWIAASDAKAEVSYMQQNAQSVVAGNLAEFGTTETVPSWNHVSQGNNGYPEHMVFDPQYPGWYYDTIAQEWRLLETYNSLVQSSDQRLENGRVSTSTFSHNDNNLYKDYGQAGYYESQGVGGQATVDNWSGSYGSNHQQGLETHTTGTATKTGGSATYGGNRQFDHSFGSSISANKEQPNSSSSFGSVPLYNKNNHGHGLANGTVEQQRFAPSGNFVQHFNYSNTQFDEQKNFSNDYAENHQPFSYSSQSFHGGHQHSHAPHVGRSSIGRPPHALVTFGFGGKLIIMKDYSDLSSTYGSQSVVQGSVSVLNLMEVVSQSIASSSIGNGAGDYFRALGQQSIPGPLVGGSVGNKELNKWIDEKIAYCGSPDMDYKKSERMRLLLSLLKIGCQHYGKLRSPFGTDNILKENDTPESAVAKLFASAKMSGKEYGVLSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQEGQLWGPALVLASQLGEKFYVDTVKQMALRQLVAGSPLRTLCLLIAGQPAEVFSSDSSNSGDPSAFNMPQQPAQFGSNGMLDDWEENLAVITANRTKGDELVIIHLGDCLWKERSEITAAHICYLVAEANFESYSDSARLCLIGADHWKFPRTYASPKAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLKYCQAVLKSLKTGRAPEVETWKQLLSSLEERIKTHQQGGYAANLAPGKLVGKLLNFFDSTAHRVVGGGLPPHAPSSSQGNVNGNEHQPMAHRVSNSQSTMAMSSLVPSDSMEPISEWTTDNNRMSKPNRSVSEPDFGRSPRQETSHGAQGKASEGTSRFSRFSFGSQLLQKTMGLVLKPRPGKQAKLGEKNKFYYDEHLKRWVEEGAEPPAEETALPPPPTTATFQNGLTEYNLKSASKTEGPPSKGGSDLKNSNPEHTPGIPPIPPGTNHFATRGRVGVRSRYVDTFNQGGGSSANLFQSPSVPSAKPALAVKAKFFIPAPAPSSNEQTMEAIEENNLEDNLANEYPSTSYRNDGSFQSPKPATPLVRHPSMGNVSNYGAVMNGSNCSSPHSRRTASWGGSIGDSFSPTKLREIMPLGEALGMPPSMYMSDDVSMVGTHMRSGSVGEDLHEVKFMKKEKIPYPATFFPTPCFALNAKRVGTGRHLRLKPLQLNRTKRNQSKKENHKFFFAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01247 1504 MobiDBLite consensus disorder prediction 1166 1187 - -
Car07g01247 1504 MobiDBLite consensus disorder prediction 22 37 - -
Car07g01247 1504 MobiDBLite consensus disorder prediction 1066 1090 - -
Car07g01247 1504 MobiDBLite consensus disorder prediction 391 459 - -
Car07g01247 1504 CDD ACE1-Sec16-like 600 967 - -
Car07g01247 1504 MobiDBLite consensus disorder prediction 78 118 - -
Car07g01247 1504 MobiDBLite consensus disorder prediction 1166 1205 - -
Car07g01247 1504 MobiDBLite consensus disorder prediction 998 1090 - -
Car07g01247 1504 MobiDBLite consensus disorder prediction 1138 1157 - -
Car07g01247 1504 PANTHER RGPR-RELATED 1 1380 IPR024880 GO:0006914|GO:0048208
Car07g01247 1504 MobiDBLite consensus disorder prediction 1004 1060 - -
Car07g01247 1504 Pfam Sec23-binding domain of Sec16 711 970 IPR024298 -
Car07g01247 1504 Gene3D - 526 953 - -
Car07g01247 1504 MobiDBLite consensus disorder prediction 1452 1482 - -
Car07g01247 1504 MobiDBLite consensus disorder prediction 1464 1482 - -
Car07g01247 1504 Pfam Vesicle coat trafficking protein Sec16 mid-region 531 652 IPR024340 -
Car07g01247 1504 MobiDBLite consensus disorder prediction 506 526 - -
Car07g01247 1504 MobiDBLite consensus disorder prediction 1 118 - -
Car07g01247 1504 Pfam Ribosomal protein S30 1445 1501 IPR006846 GO:0003735|GO:0005840|GO:0006412
Car07g01247 1504 PANTHER SECRETORY 16, ISOFORM I 1 1380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01247 Car-Chr7 11300258 11311243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01247 1443 1504 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.774 1.89e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01247 K20353 - gmx:100795588 1791.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00305 08 2407130 2415164 Car07g01247 07 11300258 11311243 PCT