Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01218 ATGGATTTGAAGCCTTCTCATGCCTCTTCCCCTATTCTTATTGATCCTGTAAACAAGTCACGGCTTGGGATCCATTCTAGTTTATTAGCTTATTCCCAACAAGATTCATCACTCTCTCCAGGGAAATACTCAAAATCCAATTCAAAGAAAAGTATGGGAGGTCTTGATGATGTTAGGTCTAATGGTTGGTTGGATGCTATGAAGGCTTCTTCTCCTCCAAGAAAGAAGACAATACATAAAGGTTCGAGCGCTCAGGTTGCTTCAGTTGACTATGACATCGAAGACTATAATCTATGGATGCTAGGATATCCTTCAGCACTAGAATCTTTTGAGAAAATCATTGACCGTGCAAAGGACAAGAAGATTGCAATGTTTCTAGATTATGATGGCACACTTTCACCTATAGTAGATGATCCAGACCGTGCTTTTATGTCTGAACCTGTAACAATTATTAGTGGAAGAAGTCGTGACAAGGTATTTGATTTAGTTAAACTAACAGAACTCTACTATGCCGGTAGTCATGGAATGGACATAATTGGCCCTGGATGTGACACTTTGTCCAATAACCATCCAAATTGTGTTAAGTCTACTGACCGTCAGGGAAAGGAGATAACTCTCTTTCAACCGGCTAGAGAGTTCCTTCCTATGATTGATGAGGTTTTTAGAACCCTCGTCGAGATAACTAAAGATATAAAAGGCGCAAAAGTTGAAAATCACAAGTTTTGCGTTTCTGTACATTACCGTAACGTAGAAGAGAATAATTGGACAACTATTGGACAACGCGTCCATGATATCTTAAAAAAGTATCCTCGTCTACGTTCAACTCATGGACGAAAGGTTTTAGAAATTCGTCCTGTAATTGATTGGAACAAAGGAAAAGCTGTTGAATTTTTACTTGAATCTTTAGGATTAACTGATAGGAATGATGTGCTTCCCATCTACATTGGAGATGATAAAACTGATGAAGATGCATTCAAGGTGTTACGGGAGAGCAATAGAGGGTATGGGATATTGGTTTCATCTGTGAGAAAAGAAAGCAATGCTTTTTACTCTCTCCGAGACACCAATGAGGTTATGAAATTTCTTCAACTCTTGGTGAATTGGAAGAGGGAGCAAGATAGGAAGAATGGGAAGAAATAA 1140 0.3877 MDLKPSHASSPILIDPVNKSRLGIHSSLLAYSQQDSSLSPGKYSKSNSKKSMGGLDDVRSNGWLDAMKASSPPRKKTIHKGSSAQVASVDYDIEDYNLWMLGYPSALESFEKIIDRAKDKKIAMFLDYDGTLSPIVDDPDRAFMSEPVTIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPGCDTLSNNHPNCVKSTDRQGKEITLFQPAREFLPMIDEVFRTLVEITKDIKGAKVENHKFCVSVHYRNVEENNWTTIGQRVHDILKKYPRLRSTHGRKVLEIRPVIDWNKGKAVEFLLESLGLTDRNDVLPIYIGDDKTDEDAFKVLRESNRGYGILVSSVRKESNAFYSLRDTNEVMKFLQLLVNWKREQDRKNGKK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01218 379 MobiDBLite consensus disorder prediction 35 59 - -
Car07g01218 379 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 375 IPR044651 GO:0004805|GO:0005992
Car07g01218 379 MobiDBLite consensus disorder prediction 35 54 - -
Car07g01218 379 SUPERFAMILY HAD-like 123 369 IPR036412 -
Car07g01218 379 TIGRFAM T6PP: trehalose-phosphatase 120 366 IPR003337 GO:0003824|GO:0005992
Car07g01218 379 CDD HAD_TPP 123 360 - -
Car07g01218 379 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 375 - -
Car07g01218 379 Pfam Trehalose-phosphatase 125 355 IPR003337 GO:0003824|GO:0005992
Car07g01218 379 Gene3D - 122 198 IPR023214 -
Car07g01218 379 Gene3D - 208 379 IPR023214 -
Car07g01218 379 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 124 329 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01218 Car-Chr7 11012314 11015483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01218 120 362 Trehalose Biosynthesis Gene Families AT1G23870 23.881 5.73e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01218 K01087 - tcc:18606311 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01218 07 11012314 11015483 Car07g01218 07 11012314 11015483 ECH