Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01213 ATGAACACATTTTCACATGTACCTCCGGGGTTTCGTTTTCATCCAACTGATGAAGAACTTGTTGATTACTACCTGCGGAAGAAGGTTTCATCTAAAAAGATCGATTTAGATGTCATCAAAGACGTGGATCTCTATAAAATTGAACCGTGGGATCTTCAAGAACTATGCAAAATAGGAAGCAATGAACAAAGTGATTGGTATTTCTTTAGTCATAAAGATAAGAAGTATCCaacaggaacaagaacaaatagagcaacaaaagcaggattctggaaagcaacaggaagagATAAGGCAATATACTCAAAACATTTCCTAGTTGGAATGAGAAAGACTCTTGTGTTTTACAAAGGACGCGCTCCAAATGGACAAAAATCTGATTGGATCATGCATGAGTATCGCCTTGAAACTAATGAAAATGGAATTGCTCAGGAAGAAGGGTGGGTTGTATGCAGGGTATTCAAGAAAAGAATGACAACAGTACAAAAAATGAATGAGTATGATCAATCACCATCATGTTGGTATGATGATCAAGTTTCTTTCATGCCATCTGATCTTGAATCTCCAACTCCAACTCCTAATTATCCATCATCATATTGCAAACCAGAGATAGATCAATTAATGCAATATAACAATAACAACATTCACCACTCCCAAAATCATAATAATGCTTTTCTTCAACTTCCACACCTAATTGAATCCCCCAAACTCACTACTCAATCACAACCCTCAACTTTGAGTTACAACAACAATGCACAACACATGCAATATTTTCATCAATACCATCATCATCATCAACACTCACTTTATGGTGGTGGAAGCAGCACTAGCAATGATGAACAAGTTACAGATTGGAGAGTTCTTGACAAATTTGTTGCTTCTCAGCTTAGTCAAGATCAAGATCATGTTTCTAAACAAACTATTCTTCATGTGGCTGAACAGATTACTCTTCTTGCAAACAAAAAGCCTGAAATGTCTGAGGAACATGCTTCAACCAATTCAACCTCAAGTTGTCACAATATGGAACTATGGAAGTGA 1038 0.3439 MNTFSHVPPGFRFHPTDEELVDYYLRKKVSSKKIDLDVIKDVDLYKIEPWDLQELCKIGSNEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHFLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGIAQEEGWVVCRVFKKRMTTVQKMNEYDQSPSCWYDDQVSFMPSDLESPTPTPNYPSSYCKPEIDQLMQYNNNNIHHSQNHNNAFLQLPHLIESPKLTTQSQPSTLSYNNNAQHMQYFHQYHHHHQHSLYGGGSSTSNDEQVTDWRVLDKFVASQLSQDQDHVSKQTILHVAEQITLLANKKPEMSEEHASTNSTSSCHNMELWK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01213 345 MobiDBLite consensus disorder prediction 320 345 - -
Car07g01213 345 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Car07g01213 345 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Car07g01213 345 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 325 - -
Car07g01213 345 MobiDBLite consensus disorder prediction 329 345 - -
Car07g01213 345 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Car07g01213 345 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 325 - -
Car07g01213 345 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01213 Car-Chr7 10920974 10926437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01213 1 345 NAC Transcription Factor Family AT1G12260 58.659 2.76e-137 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car07g01213 NAM 2.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01213 - - gmx:100783529 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01213 07 10920974 10926437 Car07g01213 07 10920974 10926437 ECH
Car07g01213 07 10920974 10926437 Car05g02602 05 71045114 71052277 ECH
Car08g00286 08 2247947 2258802 Car07g01213 07 10920974 10926437 PCT