Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01211 ATGGCAGCAGCGCcttcttcttcttcttctctctGTACTCTCAATGGTTCTCACCGGAGACCAACCCCTCTTTCTCCGCTTCGCTTCATGGCTATTCGTCCTCAACACTTTCGCTCTTTCGCTTCCTCTTCGCACTTCCTTGGAACTACTCGAATTAAATCCACTTCAAACCAATTTCCTCAAAGAAGAAGACGTTTTTCTGTTTTCGCCATTTCCACTGATGAGGCGAAGCGTGCTGTCCCGTTGAAGGATTATCGCAACATTGGCATCATGGCTCATATAGACGCTGGAAAGACAACTACAACTGAACGGATTCTCTTCTATACCGGAAGAAACTACAAAATTGGAGAGGTACATGAGGGAACGGCAACAATGGATTGGATGGAACAAGAACAAGAAAGAGGGATTACCATTACTTCTGCAGCAACCACCACATTTTGGGATAAGCATAGAATCAACATCATTGATACTCCTGGTCATGTTGACTTCACCTTAGAAGTGGAGCGAGCTCTTAGGGTGTTGGATGGAGCTATATGCTTGTTTGACAGTGTTGCTGGTGTTGAGCCACAATCAGAAACTGTGTGGAGGCAAGCTGATAAATATGGGGTGCCTCGAATTTGTTTTGTCAATAAAATGGACCGCCTTGGAGCTAATTTTTTCCGAACAAGAGACATGATAGTAACAAATTTAGGTGCTAAACCACTCGTACTTCAGCTACCGATTGGTGCAGAAGATACCTTTAAGGGAGTTATTGATCTTGTTAAGATGAAAGCTATAGTTTGGAGTGGAGAAGAGCTTGGTGCCAAGTTTTCTTATGAAGATATACCTGCAGATCTCCTAGAGAAGGCTCAAGATTACAGATCACAGATGATTGAAACCATAGTTGACTTAGATGACGAGGCTATGGAGAACTACTTGGAAGGAATCGAACCAGATGAAGAAACTATTAAAAAATTAATTAGGAAGGGAGCCATAGCAGCCACTTTTGTGCCAGTGTTGTGTGGATCAGCTTTCAAAAACAAGGGGGTCCAACCGTTGTTAGATGCCGTAGTGGATTATCTACCATCACCACTTGATGTACCACCAATGAAAGGCTCTGACCCTGAAAACCCAGAAGCAATAATAGAGAGGATAGCAAGTGATGACGAATCATTTTCTGGGCTAGCTTTTAAGATCATGAGCGATTCATTTGTAGGCTCCCTTACGTTTGTCAGGGTGTATTCAGGAAAGCTAACAGCAGGGTCTTATGTACTCAATTCAAACAAAGGGAAAAAGGAAAGAATTGGTAGACTTCTAGAAATGCATGCAAACAGCAGAGAAGACGTTAAAGTAGCTTTAACAGGTGATATTGTTGCTCTTGCTGGTTTGAAAGATACTATAACTGGTGAAACATTGTGTGACCCCGATAATCCAGTCGTGCTTGAGCGTATGGACTTCCCTGATCCTGTAATTAAGATTGCAATTGAACCCAAAACTAAAGCTGACATTGACAAGATGGCAGCTGGTTTAGTTAAACTTGCTCAGGAAGACCCTTCTTTCCACTTCTCCCGTGATGAAGAGTTAAATCAAACCGTGATTGAAGGAATGGGAGAATTGCATCTTGAAATCATTGTCGATCGTCTCAAAAGAGAATATAAGGTAGAAGCTAATATTGGTGCTCCTCAAGTCAACTACAGAGAAAGCATTTCCAAAATCACAGAAGTGAAGTACGTGCACAAGAAACAATCAGGTGGACAAGGTCAGTTTGCAGATATAACCGTACGGTTTGAGCCCATGGATCCAGGTAGTGGATATGAGTTCAAGAGTGAAATCAAAGGAGGCGCAGTTCCAAAAGAATACGTTCCTGGTGTGGTTAAAGGATTGGAAGAGTCTATGAGCAACGGTGTTCTAGCCGGCTTTCCAGTTGTTGACGTACGCGCAGTACTCGTTGATGGTACTTACCATGACGTAGATTCAAGTGTGCTGGCTTTCCAGTTGGCAGCCAGAGGAGCTTTCCGGGAAGGAATGAGAAAAGCCGGACCAAAAATGCTCGAGCCTATAATGAAAGTTGAAGTTGTCACTCCTGAAGAACATTTAGGAGATGTAATTGGTGATCTCAACTCAAGAAGAGGACAGATCAACAATTTTGGTGACAAACCCGGTGGACTCAAGGTGGTTGATTCATTAGTACCTCTTGCTGAGATGTTTCAGTATGTGAGTACTCTTAGAGGGATGACGAAGGGTCGCGCGTCCTACTCAATGCAATTAGCCATGTTTGATGTGGTACCTCAACACATTCAGAATCAACTTTCCACAAAAGCACAAGAAGTTGCTGCTTAA 2319 0.426 MAAAPSSSSSLCTLNGSHRRPTPLSPLRFMAIRPQHFRSFASSSHFLGTTRIKSTSNQFPQRRRRFSVFAISTDEAKRAVPLKDYRNIGIMAHIDAGKTTTTERILFYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVLQLPIGAEDTFKGVIDLVKMKAIVWSGEELGAKFSYEDIPADLLEKAQDYRSQMIETIVDLDDEAMENYLEGIEPDEETIKKLIRKGAIAATFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDVPPMKGSDPENPEAIIERIASDDESFSGLAFKIMSDSFVGSLTFVRVYSGKLTAGSYVLNSNKGKKERIGRLLEMHANSREDVKVALTGDIVALAGLKDTITGETLCDPDNPVVLERMDFPDPVIKIAIEPKTKADIDKMAAGLVKLAQEDPSFHFSRDEELNQTVIEGMGELHLEIIVDRLKREYKVEANIGAPQVNYRESISKITEVKYVHKKQSGGQGQFADITVRFEPMDPGSGYEFKSEIKGGAVPKEYVPGVVKGLEESMSNGVLAGFPVVDVRAVLVDGTYHDVDSSVLAFQLAARGAFREGMRKAGPKMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINNFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYSMQLAMFDVVPQHIQNQLSTKAQEVAA 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01211 772 Gene3D Translation factors 367 482 - -
Car07g01211 772 CDD EF-G 87 357 - -
Car07g01211 772 Pfam Elongation Factor G, domain III 479 552 IPR041095 -
Car07g01211 772 Gene3D - 76 366 IPR027417 -
Car07g01211 772 SMART EFG_C_a 675 763 IPR000640 -
Car07g01211 772 PANTHER RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL 65 765 - -
Car07g01211 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 356 IPR027417 -
Car07g01211 772 Pfam Elongation factor G C-terminus 676 762 IPR000640 -
Car07g01211 772 Pfam Elongation factor G, domain IV 554 672 IPR005517 GO:0005525
Car07g01211 772 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 83 358 IPR000795 GO:0003924|GO:0005525
Car07g01211 772 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 65 765 - -
Car07g01211 772 SUPERFAMILY Translation proteins 339 479 IPR009000 -
Car07g01211 772 Gene3D Elongation Factor G (Translational Gtpase), domain 3 483 559 - -
Car07g01211 772 Gene3D - 560 762 IPR014721 -
Car07g01211 772 SUPERFAMILY EF-G C-terminal domain-like 479 556 IPR035647 -
Car07g01211 772 Gene3D - 679 750 - -
Car07g01211 772 SUPERFAMILY EF-G C-terminal domain-like 678 767 IPR035647 -
Car07g01211 772 Pfam Elongation factor Tu domain 2 399 466 IPR004161 GO:0005525
Car07g01211 772 Hamap Elongation factor G, chloroplastic. 75 772 IPR030848 GO:0003746|GO:0006414|GO:0009507
Car07g01211 772 PRINTS GTP-binding elongation factor signature 87 100 IPR000795 GO:0003924|GO:0005525
Car07g01211 772 PRINTS GTP-binding elongation factor signature 133 141 IPR000795 GO:0003924|GO:0005525
Car07g01211 772 PRINTS GTP-binding elongation factor signature 153 163 IPR000795 GO:0003924|GO:0005525
Car07g01211 772 PRINTS GTP-binding elongation factor signature 169 180 IPR000795 GO:0003924|GO:0005525
Car07g01211 772 PRINTS GTP-binding elongation factor signature 205 214 IPR000795 GO:0003924|GO:0005525
Car07g01211 772 TIGRFAM small_GTP: small GTP-binding protein domain 85 255 IPR005225 GO:0005525
Car07g01211 772 CDD EFG_mtEFG1_IV 558 673 IPR005517 GO:0005525
Car07g01211 772 CDD EFG_III 480 555 IPR009022 -
Car07g01211 772 TIGRFAM EF-G: translation elongation factor G 78 767 IPR004540 GO:0003746|GO:0005525|GO:0006414
Car07g01211 772 CDD EFG_mtEFG_C 678 756 IPR035649 -
Car07g01211 772 CDD EFG_mtEFG_II 385 467 - -
Car07g01211 772 Pfam Elongation factor Tu GTP binding domain 84 356 IPR000795 GO:0003924|GO:0005525
Car07g01211 772 SUPERFAMILY Ribosomal protein S5 domain 2-like 554 674 IPR020568 -
Car07g01211 772 Hamap Elongation factor G [fusA]. 81 767 IPR004540 GO:0003746|GO:0005525|GO:0006414
Car07g01211 772 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 126 141 IPR031157 -
Car07g01211 772 SMART EFG_IV_2 555 673 IPR005517 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01211 Car-Chr7 10895280 10899414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01211 71 743 Eukaryotic Initiation Factors Gene Family AT1G56070 25.000 1.59e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01211 K02355 - gmx:102663021 1359.74