Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01201 ATGGAGGCTAGTGGCGGTGTTAGTGGTGGCGTTACGGTGGTCGGATCGGATGCTCCGTCGGAGTACCATGTAGCTCCGAGAACCGACAACCAAACTCCAGCAACTGGATCGGCGGCTCATACTTCTACGGCGGTTCAAGGAAGTGATCAGCCGCCTCCTCCGCCGCATACGGCGGCGATATCGGCATCACCGGCAGCTACGACGATGCCGGAGAAGAAGAAGAGAGGTCGTCCGAGAAAGTATGCACCGGATGGTTCGGTGACGATGGCGTTGTCTCCGAAGCCGATATCTTCTTCAGCTCCGTTGCCGCCAGTGATCGATTTCACGGCGGAGAAGCGTGGAAAAGTGCGGCCAGTTAGCTCAGTGAGCAAGGCCAGATTTGAGTCGCACAATAATCAGTATATAGGTGAATGGGTCCCTTGCTCAGTTGGTTCAAATTTTACACCCCACATCATCACTGTTAATGCTGGAGAGGATGTTACTATGAAGGTAATATCATTTTCTCAGCAAGGGCCTCGAGCTATATGCATTCTTTCAGCAAATGGCGTCATAAAAAGTGTCACGCTTCGTCAGCCCGATTCTTCTGGAGGCACATTGACATATGAGGGACTGTTTGAAATTTTGTCTTTATCTGGTTCATTCATGCCAAATGAAAGTGGAGGAACACGAAGCAGATCAGGGGGTATGAGTGTTTCTTTAGCAAGTCCCAATGGACGTGTTGTTGGCGGAGGAGTAGCTGGTCTGTTGGTGGCTGCAAGTCCAGTGCAGGTAGTGGTTGGTAGTTTTATGGCAGGAAACCAACATGAGAAGCCAATAACTCAGAAACATGATATCATATCAACTGTGACATCTACCGCTGTTGTTCCCATCACTGATCCAATACCTATTCTATCATCAGCATCTTCCTTCCGTGGAGATAATTGGTCTGCTGTGCCAGCACCGGATAAAAAGGATAACCCTTCTGCTGACATTAACGTGTCACTTCCTGGAGGCTAA 996 0.495 MEASGGVSGGVTVVGSDAPSEYHVAPRTDNQTPATGSAAHTSTAVQGSDQPPPPPHTAAISASPAATTMPEKKKRGRPRKYAPDGSVTMALSPKPISSSAPLPPVIDFTAEKRGKVRPVSSVSKARFESHNNQYIGEWVPCSVGSNFTPHIITVNAGEDVTMKVISFSQQGPRAICILSANGVIKSVTLRQPDSSGGTLTYEGLFEILSLSGSFMPNESGGTRSRSGGMSVSLASPNGRVVGGGVAGLLVAASPVQVVVGSFMAGNQHEKPITQKHDIISTVTSTAVVPITDPIPILSSASSFRGDNWSAVPAPDKKDNPSADINVSLPGG 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01201 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 149 262 IPR005175 -
Car07g01201 331 Gene3D - 149 281 - -
Car07g01201 331 CDD DUF296 148 239 IPR005175 -
Car07g01201 331 ProSiteProfiles PPC domain profile profile. 144 285 IPR005175 -
Car07g01201 331 MobiDBLite consensus disorder prediction 308 331 - -
Car07g01201 331 MobiDBLite consensus disorder prediction 1 102 - -
Car07g01201 331 MobiDBLite consensus disorder prediction 25 47 - -
Car07g01201 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 329 - -
Car07g01201 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 329 IPR039605 GO:0003680
Car07g01201 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01201 Car-Chr7 10782021 10786034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01201 1 328 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.901 2.88e-119 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01201 - - gmx:100801730 464.922