Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01182 ATGGATTATTTCCTTTTCATTGCTCTCACTTTCATGTTGAGCTTCCATATTCATTTTACTCAAGGAAGTGAACTGGTCCCTACCGAAACAAGCAGTTCAAAAATAtacattattcatgtgaatgagccagagggtaagatgttttctcaatcagaagatttagaaagttggcatcattcattcatgccacctactgttatgacctctaaggaacaacaaccacgaatgatttattcatatagaaatgtgctgagtggttttgctgcaagactgactcaagaagagctgagagctgtgcagcagaaaaatggcttcatttcagctcatcccgaaaggatgctacgtcgtcaaacaacacatacaccagatttcttggggttgcagcaagatattggattatggaaggactcaaattttggaaagggagtaattattggtgttctggattcaggaatcacacctgatcatccttcattcagtgatgcaggaatactaccgccaccgctcaaatggaaagggagatgtgaacttaatggtacagcatgtaacaacaaactaattggagcaaggtcctttaacaatgcagctaaggcaaggaaaggagagaagggtgaggcgccgattgatgaggatggacacgggactcacacagcaagtacagcggctggtgcttttgtggacaaagcacaagtactgggaaatgccaaaggtacagcagcagggatggctcctcatgctcacctagcAATTTACAAAGTGTGCTTTGGAGAAGACTGTCCGGAGAGTGATATACTAGCGGCATTAGACGCAGCTGTGGAGGATGGTGTGGATGTAATATCGATATCGCTTGGTCTAAGCCAGCCGCCTCCATTTTTTAATGACAGCACTGCTATAGGGGCTTTTGCAGCAATTCAAAAGGGAATCTTTGTAAGTTGTGCAGCAGGAAATTTTGGCCCTTTTGATGGTTCACTGGTTAATGGAGCTCCATGGATTCTCACTGTTGGAGCAAGTACTATTGACAGAAGCATTGTTGCAACAGCAAGGCTTGGAAATGCGGAAGAATTTAATGGTGAGTCTGTTTTCCAGCCTTCCAATTTTTCTCCAACATTGTTGCCCTTGGCATATGCAGGAAAGAATGGAAAACAAGCATCGACATTTTGTGCTAATGGATCATTGAGTGACATTGATTTCAGAGGCAAGGTTGTTTTGTGTGAGAGGGGAGGGGGTATAGGAAGAATTGCCAAAGGAGAGGAAGTAAAAAGAGCAGGTGGTGCAGCCATGATTCTGACAAATGATAAAATCAATGGTTTCAGTCTCTCAGCTGATGTACATGTCCTACCAGCAACACATGTAAGCTATGCAGCTGGACTAAAAATCAAGGCCTACATAAATTCCACTGCAACACCAACAGCAAACATTTCATTTAAAGGAACGATTATTGGAAACTCGCTATCGCCAGCCGTTGCATCGTTCTCTTCAAGAGGTCCTAACTTACCAAGTCCTGGTATATTAAAACCAGATATCATAGGACCAGGTGTGAACATCCTAGCTGCATGGCCATTCCCTCTGAATAACAACACCAATTCAAACCTCAATTTCAACATTATGTCTGGAACATCAATGTCATGCCCACATCTTAGTGGCATTGCTGCTTTGCTTAAAAGCTCTCATCCTCATTGGTCACCAGCTGCTATAAAATCTGCCATAATGACTTCTGCAGACACACTAAATTTAAGAAACAAACCCATTGTTGATGAAAAACTTCAGCCTGCAAATCTCCTTGCGACCGGTTCGGGCCACGTGAATCCATCAAAAGCAAATGATCCTGGATTGGTATATGATATCCAACCTGATGATTATATACCTTATCTCTGTGGTTTAGGCTACAGTGATGTGGAAGTTGGGATCATTGCACACAAGACCATTAAATGCAGTGAGACTTCAAGCATTGCTGAAGGAGAGCTTAACTACCCTTCATTCTCTGTTGTGCTTGGTTCTTCACAGACATTCACAAGGACAGTGACAAATGTAGGTGAGGCCCACTCAACTTATGGTGTCACAGTTTCGGCACCAAAAGGGGTTGATGTGAAGGTCCAGCCAAAAAAGCTTATCTTTTCAAAAGCCAACCAGAAAGAAACATATTCAGTGACATTCAACCGTATAGGGTTGGGTAATAAGACAGAAGAATATGCTCAAGGATTTCTAAAATGGGCATCTGCTAAACACTCTGTCAGGAGTCCTATCTTGGTCAAATTTGCATAG 2262 0.3006 MDYFLFIALTFMLSFHIHFTQGSELVPTETSSSKIYIIHVNEPEGKMFSQSEDLESWHHSFMPPTVMTSKEQQPRMIYSYRNVLSGFAARLTQEELRAVQQKNGFISAHPERMLRRQTTHTPDFLGLQQDIGLWKDSNFGKGVIIGVLDSGITPDHPSFSDAGILPPPLKWKGRCELNGTACNNKLIGARSFNNAAKARKGEKGEAPIDEDGHGTHTASTAAGAFVDKAQVLGNAKGTAAGMAPHAHLAIYKVCFGEDCPESDILAALDAAVEDGVDVISISLGLSQPPPFFNDSTAIGAFAAIQKGIFVSCAAGNFGPFDGSLVNGAPWILTVGASTIDRSIVATARLGNAEEFNGESVFQPSNFSPTLLPLAYAGKNGKQASTFCANGSLSDIDFRGKVVLCERGGGIGRIAKGEEVKRAGGAAMILTNDKINGFSLSADVHVLPATHVSYAAGLKIKAYINSTATPTANISFKGTIIGNSLSPAVASFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNNTNSNLNFNIMSGTSMSCPHLSGIAALLKSSHPHWSPAAIKSAIMTSADTLNLRNKPIVDEKLQPANLLATGSGHVNPSKANDPGLVYDIQPDDYIPYLCGLGYSDVEVGIIAHKTIKCSETSSIAEGELNYPSFSVVLGSSQTFTRTVTNVGEAHSTYGVTVSAPKGVDVKVQPKKLIFSKANQKETYSVTFNRIGLGNKTEEYAQGFLKWASAKHSVRSPILVKFA 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01182 753 CDD Peptidases_S8_3 117 574 IPR034197 -
Car07g01182 753 Gene3D Peptidase S8/S53 domain 142 620 IPR036852 GO:0004252|GO:0006508
Car07g01182 753 MobiDBLite consensus disorder prediction 198 217 - -
Car07g01182 753 MobiDBLite consensus disorder prediction 198 212 - -
Car07g01182 753 SUPERFAMILY Subtilisin-like 117 611 IPR036852 GO:0004252|GO:0006508
Car07g01182 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 750 IPR045051 -
Car07g01182 753 Pfam Subtilase family 140 583 IPR000209 GO:0006508|GO:0008236
Car07g01182 753 Pfam PA domain 373 459 IPR003137 -
Car07g01182 753 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 145 156 IPR023827 -
Car07g01182 753 Gene3D - 624 752 - -
Car07g01182 753 ProSiteProfiles Serine proteases, subtilase domain profile. 124 607 - -
Car07g01182 753 CDD PA_subtilisin_like 346 473 - -
Car07g01182 753 Pfam Peptidase inhibitor I9 36 115 IPR010259 -
Car07g01182 753 Gene3D - 340 480 - -
Car07g01182 753 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 31 750 - -
Car07g01182 753 Pfam Fibronectin type-III domain 654 750 IPR041469 -
Car07g01182 753 SUPERFAMILY PA domain 389 465 IPR046450 -
Car07g01182 753 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Car07g01182 753 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Car07g01182 753 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Car07g01182 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 116 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01182 Car-Chr7 10608959 10611500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01182 5 752 Subtilisin-like Serine Gene Family AT1G04110 44.629 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01182 - - gmx:100785376 1234.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01182 07 10608959 10611500 Car07g01182 07 10608959 10611500 ECH
Car07g01182 07 10608959 10611500 Car08g00257 08 2069706 2071388 PCT