Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01167 ATGTTGGCTGGTTGTTCTAGCTCGACATTGTTGTCACCAAGTCACAGATTAAGGAGTGAAGCATCTGCACAGTTTCAAGCTTGTCATTTTCAGCTACCTTCAATGAGCACACAGAGATTGGATTTACCTTGTAGCTTCCCTCGGAAAGACGGTTCTTCGCGTTCGCAGCAGTCTGTGATCAGGCCGGTCGGGATTTCGGTGGAGAAGCCTATTGAAGCCAAGAAcagcagcaacagcagcagcaCTTGTTCTCTGCAGCAGAACATTCGACTTCCACCGTTAGCAACCACTGCTCAGACATTGGGTGAGATCAAAGATGAGGAATTTTGGGAGAAGGGTGGGAGGAATTTGAAGAGGCTTGCAGAACATGGATCTTTGGATGAGTCTTTCACAACAAATAGAGCCAAGAGGAAAAAGGGTAGCAGTGGTAATGAGAATTCTGATGAATTTGGAGGCGAAAATTTCAGTTTTTCACAAATTGGTGGTGCTGGTAACTTTTGGTCTGTTCATGGATTTGGAGGATTTAATAACCCTTCTTCACTTCCTTTCTCTCTGAATTGTTCTGGAGATGAGGAAAGGATCACAAATTTCGGTGAGGGTAGTCACCAACATCAACATCATCATGTCAATGAAGGTTCAGTCTCCAATGGTTCATCAGAAAGCCAGAGCTTGAGCTTGAGGTTTAATGAGAATGCATCAGAACATGAAGAAGGTAATGGTTCAGGGAATCCTTATCAGCACGAAGGCACCGAAGTGGAGACAGGAGAAGAGGGTGAACAAGAGGAGCATCGCGGTTTTGAGCTGCTGAGTTTGCTCACTGGTTGTGTTGAGGCTATTGGATCAAGGAATGTGGCTGCAATCAACCATTTTATTGCTAAATTGGGTGATCTTGCATCTCCCAGGGGAACCTCGATAAGCCGCATTTGTGCTTATTTTACAGAAGCCTTAGCCATCAGGGTCACTAGGCTTTGGCCTCATGTTTTTCACATCACCGCCACTTCTCGCGATCTTGATAGAGTGGTGGATGATGATGAAACTGCCACTGCATTGAGGCTTCTAAATCAGGTTACCCCAATTCCCAAGTTTCTTCATTTCACATCAAATGAGATGCTGTTGAGGGCTTTTGAAGGGAAAGAAAGGGTTCACATTATAGACTTTGACATAAAGCAAGGACTTCAATGGCCTAGCTTGTTCCAAAGTTTATCTTCTAGGACTAATCCTCCTAGTCATGTTCGAATTACTGGTGTAGGGGAGTCCAAACAAGAGCTGAACGAAACTGGAGACAGGCTTGCAGGGTTTGCTGAGGCTCTGAACCTTCCATTTGAGTTCCATCCTGTGGTGGACAGACTTGAAGATGTGAGACTTTGGATGCTTCATGTGAAGGAACATGAAACTGTAGCTGTAAACTGTGTTTTGCAGCTTCACAAGACACTTTATGATGGTAGTGGAGGAGCATTGAGGGACTTTTTGGGCCTTATTCGTAGTACCAATCCTACAGTTGTGGTCATGGCAGAGCAAGAAGCGGAACACAACGCTGCTCGGTTGGATACAAGAGTGTGCAATTCGCTGAAATACTACTCGGCACTGTTCGATGCAATTGATCATAGTGGCCTTCCACTGGAGAGTCCAATGAGGATCAAGATAGAGGAAATGTATGCAAGGGAGATAAGGAACATCGTTGCTTGTGAAGGAAGGGACAGGTTGGAGAGGCACCAGAGTTTTGGGAATTGGAGGAAGATGATGGTGGAGCATGGAGGGTTCAGATGCATGGGAGTCACCGAGAGGGAAACGATTCAGAGCCAGTTTTTGATGAAGATGTATTCTTGTGATAATTACAGCATCAAGAAGCAAGAGAAGGAAGGAGCAACGGCACTTACTTTGGGTTGGCTTGATCAACCTCTCTATACAGTATCGTCTTGGGCACCGGTTGATGTTGCTGGAAGCTCGTCTTCTTTTTCTCAACCAGCTTGA 1971 0.448 MLAGCSSSTLLSPSHRLRSEASAQFQACHFQLPSMSTQRLDLPCSFPRKDGSSRSQQSVIRPVGISVEKPIEAKNSSNSSSTCSLQQNIRLPPLATTAQTLGEIKDEEFWEKGGRNLKRLAEHGSLDESFTTNRAKRKKGSSGNENSDEFGGENFSFSQIGGAGNFWSVHGFGGFNNPSSLPFSLNCSGDEERITNFGEGSHQHQHHHVNEGSVSNGSSESQSLSLRFNENASEHEEGNGSGNPYQHEGTEVETGEEGEQEEHRGFELLSLLTGCVEAIGSRNVAAINHFIAKLGDLASPRGTSISRICAYFTEALAIRVTRLWPHVFHITATSRDLDRVVDDDETATALRLLNQVTPIPKFLHFTSNEMLLRAFEGKERVHIIDFDIKQGLQWPSLFQSLSSRTNPPSHVRITGVGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPTVVVMAEQEAEHNAARLDTRVCNSLKYYSALFDAIDHSGLPLESPMRIKIEEMYAREIRNIVACEGRDRLERHQSFGNWRKMMVEHGGFRCMGVTERETIQSQFLMKMYSCDNYSIKKQEKEGATALTLGWLDQPLYTVSSWAPVDVAGSSSSFSQPA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01167 656 Pfam GRAS domain family 269 640 IPR005202 -
Car07g01167 656 PANTHER SCARECROW-LIKE PROTEIN 28 6 645 IPR030027 -
Car07g01167 656 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 645 IPR005202 -
Car07g01167 656 MobiDBLite consensus disorder prediction 120 155 - -
Car07g01167 656 ProSiteProfiles GRAS family profile. 259 641 IPR005202 -
Car07g01167 656 MobiDBLite consensus disorder prediction 194 263 - -
Car07g01167 656 MobiDBLite consensus disorder prediction 210 248 - -
Car07g01167 656 MobiDBLite consensus disorder prediction 195 209 - -
Car07g01167 656 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01167 Car-Chr7 10490211 10492320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01167 1 640 GRAS Transcription Factor Family AT1G63100 54.323 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car07g01167 GRAS 3.7e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01167 - - tcc:18606459 898.656