Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01164 ATGGGAAAGGCATCAAGGTGGTTTCGTGGCCTTCTCGGTCTCAAAAAATCGGAGCATGATCAATACGTCTCACCTCAGAAGCCACCCAAGGAGAAACGCCGTTGGAGTTTCGTCAAATCATACAGAGAACAACAACACGTAGACAACACCAAACAAGCCATCACAGTCGCTGCTGCCACGGCTGCAGCTGCAGAAGCTGCAGTAGCCGCGGCTCAAGCTGCTGCCGACGTGGTCAGATTCAACAGCAGTAACGGAATCATCCGGATACGCGAACAATGGGCAGCCGTTAAGATCCAAGCCGCTTTTCGAGGCTGTTTGGCAAGGAAGGCACTGCGAGCATTAAGAGGGCTGGTGAAGCTCCAGGCACTAGTGAGAGGTCACATTGAGAGGAAACGGACAGCAGAGTGGCTGAAAAAAATGCAAGCGCTCTTACGGGCACAGACGCGAGTTAGTGCAGCACGAACCCTGCAAACCTCACAGTCAAATGTAAAGTCATCTACACTCCACCTCTATGGTCCAGCTACACCAGAAAAATCTGAAAGCCCTGTAAGATCTAGGAGCGTGAAATATGAGCATTCACCTGCACTCAAGAGAAATGGTTCCAAATCATGTCTCCCAATCAGTGGAAATATATCAGAGACTCATTTAGATGAACAATCATGGAATAGAGTAAGATCACTGATAAGAACATATAGCCGAAGCGAAGAAAAAGCTGATAGGATTGTTGAAATTGATTCTGGAAAACAACACTTCACCTCAAAACATAGAAACCTCTTTTACTCAACCAGCGACACTGATCATTATTACAGTCAAAGTTTAACCCCAACAAAAGACTCAAAATCTCATCAATCTGGTCAAAGTCTATCATGTGAGGTTCAATCTTATTACAATCCACTAAAACTCAACGAAGTTGAAGAGAGTCCGTTTTGCACTGCAAGCAATAGTCCTCAATTTTTATCAGCAACCTCAAATGATGATGGTTACAAAAGAAGCCCTTTTACTCCAACTAAGAGTGATGGTTCAAGAAACAGCTACCCTAAAGGTTATGCTGACTACCCGAGTTACATGGCGTATACAGAGTCGTCGAAGGCGAAAGTTAGATCTATGAGTGCACCAAAACAAAGGCCAATATATGAGAAATCTAGTTTATCTAATAGGTACTCACTTAATGGACATGACATGGCAAGATTGGCTTCACAGAAGACATTTACATTGCAAACAAGCTTCAGCAGCAAAGGGTATCCAGGTTCTGGTCGTTTGGATAAGCTTGGAATGCCTGTGGGGTATAGATACTGA 1296 0.4437 MGKASRWFRGLLGLKKSEHDQYVSPQKPPKEKRRWSFVKSYREQQHVDNTKQAITVAAATAAAAEAAVAAAQAAADVVRFNSSNGIIRIREQWAAVKIQAAFRGCLARKALRALRGLVKLQALVRGHIERKRTAEWLKKMQALLRAQTRVSAARTLQTSQSNVKSSTLHLYGPATPEKSESPVRSRSVKYEHSPALKRNGSKSCLPISGNISETHLDEQSWNRVRSLIRTYSRSEEKADRIVEIDSGKQHFTSKHRNLFYSTSDTDHYYSQSLTPTKDSKSHQSGQSLSCEVQSYYNPLKLNEVEESPFCTASNSPQFLSATSNDDGYKRSPFTPTKSDGSRNSYPKGYADYPSYMAYTESSKAKVRSMSAPKQRPIYEKSSLSNRYSLNGHDMARLASQKTFTLQTSFSSKGYPGSGRLDKLGMPVGYRY 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01164 431 MobiDBLite consensus disorder prediction 320 345 - -
Car07g01164 431 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 426 - -
Car07g01164 431 SMART iq_5 90 112 IPR000048 GO:0005515
Car07g01164 431 SMART iq_5 113 134 IPR000048 GO:0005515
Car07g01164 431 Pfam Protein of unknown function (DUF4005) 315 399 IPR025064 -
Car07g01164 431 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Car07g01164 431 MobiDBLite consensus disorder prediction 320 343 - -
Car07g01164 431 Gene3D - 90 144 - -
Car07g01164 431 PANTHER IQ-DOMAIN 5-RELATED 1 426 - -
Car07g01164 431 Pfam IQ calmodulin-binding motif 118 132 IPR000048 GO:0005515
Car07g01164 431 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Car07g01164 431 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Car07g01164 431 MobiDBLite consensus disorder prediction 165 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01164 Car-Chr7 10454802 10458302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01164 1 45 IQD Protein Family AT4G23060 50.980 4.01e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01164 - - gmx:100793587 504.597