Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01148 ATGGTCTCTTCCAAAAGTTCTTCATCCTCCGAAGATAATTCTCCTTCACCAAAGAAGGTCGACAATGAAGGAGCTTCACCGGAGAAACCAGTACCGCCGCCGGATACTTCAAAGAATTTGAGTATTCCGAAGCCAGTCGCTGATCCCTATGACGATATACCACCGGCACCTGATTTCAAATTTCCGTCGTTAGCTTTCAAACGGTGGATTTTATTCAGTGATCCATGGTGCAGGTTGTTGTCGCAGTCTGTACAGAATCCAAATGTGGCTATTTTCAATCCAGAGATTTCAGTTGGTTGTAGTAATAGTAGCAACATTATATTGAAGAACTGTAATATAAGTGAATATTTATGCAAGATCAAGCGTACCCAGCGCAAGGGAAGTTCTGTAGCTGTGCTAGAAAATACTAGCAGCGAAGGATCTGTGTTTGTAAATGGGGTACTCATGATTAAGAATACCAGCTGTATACTTCACTCCGGTGACGAGGTGGTTTTTTGTCTGCTGCGACATCATTCATATATTTTCCAGCAAATGGATAATGAGATTGCGGTCAAGGGTGCGGAAGTTCAAAGTGGTGTTGGGACCTCTCCTTTAGCTTGTTCTCTTTCTGACATCGAACAAGACCCTACAAGATGGAAAACTCCATCTGAGGTCACTGATAAGCCGAGCATGGGACCTGATGATATCGTTAGTCATTCTGTTCGTGATGGTACTGGAATTGAGCTCGATGACTTGAAATCAGTTTTAAATGAGCGGAATAATAAAGAAGTTGATTTTGGAGTCAGTATAGATTGGGATCGGGAGGCTGACACAGAGGAAGAGGCTGGTACAGATGCAGACAATATATCGGAAGAATGGAATAAGGGGCTGTATATGCGGGCCGCATCAACTTCGGGTACATCTGTGCGCTGTTCAGTGTTTAAAGAAAATGTTCATGCTGCAATACTGGATGGAAAAGCAATAGACATGTCTTTTGACAACTTCCCATACTATTTAAGtgagaacacaaaaaatatcttggtagctgcatgctataTACACCTGAAGCATAAACAACATGAAAAGTACACTCCAGATCTTACCACCATAAACCCTTGTATTTTGCTATCGGGACCAGCTGGATCAGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCAAAATATTTTGGAGCTAAGTTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCTGAGCTACTCAGAGATGAATTTAACACTGAAAGTCACTTGTTCAAATTAGGTGATAAAGTGAAATTTAGCTGCTCTTCTTGTGGCTCGTCTCAAACATCTCCAAGGGGCCCTCCTGATGGTAGTCGAGGGAACGTTGTCTTGCTATTTGATAATAATCGCTTCTCTAAAATTGGTGTGAGATTTGATAAACGCATACCTGATGGAGTTGATCTTGGAGGTGCATGTGAGGCTGGTCATGGCTTTTTCTGCAATGACTATGATCTTTGCTCAGAAAACTGTGTCCCAGATCTGGACAAATTACTTATTGATTCATTGTTTGAGGTTGTTTTTAGTGAAAGTAGAAGTGCACCATTCATTTTGTTCATGAAAGATGCAGAAAAGTCGATAGCTGAAAATGGAGATCCAATTTCATTTAGATGTAAGCTTGATAAGCTTCCAAACAATGTGGTGGTAATAGGTTCACAAACTTGCCTTGACAATCGCAAGGAGAAGAACAAGGCAAAGGAAGTCCCAAAGCTAAACAATTCTTTAACTAAGCTTTTCCCAAATAAAGTTACAATTCCCATACCACAGGATGAGGCACTTCTAGCATCATGGAAGCAGCAACTGTATCGAGACGTAGAGACTTTGAAAATCAAAGAAAATTTGCATCAATTATGCGCTGTTTTGAGCCGCTGTCGAATTGAATGTGAAGAACTTGAGACCTTGTGCATTAAAGATCAGACACTTACAAATGAAAATGCAGAGAAGATCATTGGTTGGGCTCTTAGTCACCACATCATGCAGAAATCTGAAGCTAATCTTGATTCAAAGCATGTATTGTCGTGTGAGAGCATCCATTATGGATTCGGGATCTTGCGGTCTCTCCAAAATGAGTCCAAAAGCATGAAGTCTCTTAAGGATATTGTAACCGAAAATGAGTTTGAAAAGAGACTTTTGGCTGATGTTATTTCACCAAGCGACATTAACATTACTTTTGATAATATCGGAGCTCTTGAAAATGTCAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAGCTTTTTTGTAAAGGGCAATTAGCCAAGCCATGCAAGGGTATCCTATTATTTGGTCCCCCCGGAACAGGCAAAACGATGCTTGCAAAAGCAATTGCAACTGAAGCTGGTGCAAACTTCATCAATATTTCTATGTCGTGCATTACGTCTAAGTGGTTTGGTGAGGCTGAGAAGTACGTGAAAGCTGTTTTCTCTTTGGCGAGTAAAATTGCTCCTAGTGTTATATTTGTTGATGAAGTTGACAGCATGTTGGGTCGAAGAGAAAATCAAGAGGAGCATGAGACCATACCTTTTGACCTAGATGAGGCTGTTATTAGGAGGCTGCCACGAAGATTGATGATAAATTTGCCAGATGCTCCAAATAGAGCGAAAATATTGAATGTTATACTTGGGAAAGAGGAATTGTCTCCCGATGTTGATTTGGATGCAGTTGCAAGCATGACTGAGGGATATTCTGGAAGTGATCTTAAGAATTTGTGCGTAACTGCTGCACATTATCCGATTAAAGAGTTATTGGAAAAGGAAAAAAAGGAACGTGCTACTGCTCTACAAAAAGGTCGACCTGCTCCTGCATTACACGACAGTGGGGACGTCCGATCTTTAAACATGAAAGACTTTAAATGTGCTCATCAACAGGGCTTCCAGGGCTTGCTTGCTGTTGAGTCATTTCGTTTATAA 2961 0.4046 MVSSKSSSSSEDNSPSPKKVDNEGASPEKPVPPPDTSKNLSIPKPVADPYDDIPPAPDFKFPSLAFKRWILFSDPWCRLLSQSVQNPNVAIFNPEISVGCSNSSNIILKNCNISEYLCKIKRTQRKGSSVAVLENTSSEGSVFVNGVLMIKNTSCILHSGDEVVFCLLRHHSYIFQQMDNEIAVKGAEVQSGVGTSPLACSLSDIEQDPTRWKTPSEVTDKPSMGPDDIVSHSVRDGTGIELDDLKSVLNERNNKEVDFGVSIDWDREADTEEEAGTDADNISEEWNKGLYMRAASTSGTSVRCSVFKENVHAAILDGKAIDMSFDNFPYYLSENTKNILVAACYIHLKHKQHEKYTPDLTTINPCILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLRDEFNTESHLFKLGDKVKFSCSSCGSSQTSPRGPPDGSRGNVVLLFDNNRFSKIGVRFDKRIPDGVDLGGACEAGHGFFCNDYDLCSENCVPDLDKLLIDSLFEVVFSESRSAPFILFMKDAEKSIAENGDPISFRCKLDKLPNNVVVIGSQTCLDNRKEKNKAKEVPKLNNSLTKLFPNKVTIPIPQDEALLASWKQQLYRDVETLKIKENLHQLCAVLSRCRIECEELETLCIKDQTLTNENAEKIIGWALSHHIMQKSEANLDSKHVLSCESIHYGFGILRSLQNESKSMKSLKDIVTENEFEKRLLADVISPSDINITFDNIGALENVKDTLKELVMLPLQRPELFCKGQLAKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSCITSKWFGEAEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENQEEHETIPFDLDEAVIRRLPRRLMINLPDAPNRAKILNVILGKEELSPDVDLDAVASMTEGYSGSDLKNLCVTAAHYPIKELLEKEKKERATALQKGRPAPALHDSGDVRSLNMKDFKCAHQQGFQGLLAVESFRL 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01148 986 Pfam FHA domain 97 165 IPR000253 GO:0005515
Car07g01148 986 MobiDBLite consensus disorder prediction 1 15 - -
Car07g01148 986 Gene3D - 878 948 - -
Car07g01148 986 SUPERFAMILY SMAD/FHA domain 75 168 IPR008984 GO:0005515
Car07g01148 986 CDD FHA 94 176 IPR000253 GO:0005515
Car07g01148 986 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 72 410 - -
Car07g01148 986 Pfam ATPase family associated with various cellular activities (AAA) 776 853 IPR003959 GO:0005524|GO:0016887
Car07g01148 986 Gene3D - 75 184 - -
Car07g01148 986 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 858 975 - -
Car07g01148 986 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 418 574 - -
Car07g01148 986 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 858 975 - -
Car07g01148 986 Pfam AAA+ lid domain 899 934 IPR041569 -
Car07g01148 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 733 926 IPR027417 -
Car07g01148 986 Gene3D - 734 854 IPR027417 -
Car07g01148 986 Gene3D - 858 877 IPR027417 -
Car07g01148 986 SMART AAA_5 772 948 IPR003593 -
Car07g01148 986 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 576 856 - -
Car07g01148 986 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 418 574 - -
Car07g01148 986 MobiDBLite consensus disorder prediction 1 49 - -
Car07g01148 986 CDD AAA 774 877 - -
Car07g01148 986 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 576 856 - -
Car07g01148 986 MobiDBLite consensus disorder prediction 209 228 - -
Car07g01148 986 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 72 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01148 Car-Chr7 10249884 10262627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01148 735 937 Calmodulin-binding Proteins AT3G56690 33.333 4.73e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01148 - - cam:101515422 1667.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01148 07 10249884 10262627 Car07g01148 07 10249884 10262627 ECH
Car07g01148 07 10249884 10262627 Car05g01631 05 61078887 61092306 PCT