Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01146 ATGGAGTCTCTCTCCGGGGCGCATTTCTCCGGTTGGCATCCTTCATCCACGTCATCATCCTCTTCTCAAAATATCTTCGTAATCGGAGTCTCTGGAGGTACCGCATCGGGGAAAACCACAGTCTGTGACATGATTATTCAACAGCTGCAAGATCACAGAGTTGTTCTCGTCAATCAGGATTCGTTCTATCGTGGTTTAACAAATGATGAATCGAAACACGTTCATGAGTATAATTTCGATCATCCTGATGCATTTGACACAGAGCAACTTGTAGAAACACTCACCAAGCTTAAATCTGGACAGTCAGTTCAGGTTCCTATTTATGATTTTAATCTCCACCAGAGAGCTTCTGACAGATACAGACAGGTAAATGCATCTGAAGTAATAATTTTGGAGGGTATATTGGTTTTTCATGAACAGCGTGTCCGCGACATGATGAATATGAAGATATTTGTCGATGCAGATCCTGATGTAAGACTTTCCCGCAGAATAAAGCGAGATACTGTTGAGAGGGGTAGAGATGTGCACTCTGTACTGGAACAGTATGCTAAATTTGTTAAGCCTGCCTTCGATGATTTTATTCTTCCATCCAAAAAGTATGCTGATGTCATCATACCTCGTGGGGGAGATAATCATGTAGCAATTGATTTGATCGTTCAACATATCCGCACTAAGCTTGGCCAACATAACCTCTGTAAGATATATCCAAATTTGAATGTTATACAGTCTACTTTCCAGATTAGAGGCATGCACACTCTTATTCGTGATAGGGAAATATCGAAGCATGACTTTATTTTTTATTCGGATCGGCTAATTCGTTTGGTAGTGGAACATGGTCTTGGTTACTTGCCATTTACAGAGAAACAAGTTATCACACCTACAGGATCAATTTATATTGGAGTTGATTTTTGTAAGAAATTGTGTGGAGTCTCTGTTATTCGAAGTGGTGAAAGCATGGAAAATGCTCTGCGTGCATGCTGTAAAGGAATAAAAATAGGAAAAATTCTCATCCACCGTGAAGGTGATGAAACTCAGCTTATTTATGAGAAGCTCCCGAAAGATATTTCAGAGAGACATGTTCTTCTCATGGACCCAGTACTTGGTACAGGTAACTCTGCCAGCCAAGCAATCGAGCTTCTTATAAAGAAGGGAGTTCCAGAGTCCAGGATAATATTCCTCAACCTCGTCTCTGCTCCTGAAGGAATAGATTGTGTATGTAAACGTTTTCCACAACTGAAAGTTGTCACTTCGGAAATTGAAGAAGGACTAAATGAGCAGATCCATGTCGTGCCTGGGTTAGGAGAATTTGGTGACCGCTATTTTGGTACAGATGACCTCTAA 1341 0.4079 MESLSGAHFSGWHPSSTSSSSSQNIFVIGVSGGTASGKTTVCDMIIQQLQDHRVVLVNQDSFYRGLTNDESKHVHEYNFDHPDAFDTEQLVETLTKLKSGQSVQVPIYDFNLHQRASDRYRQVNASEVIILEGILVFHEQRVRDMMNMKIFVDADPDVRLSRRIKRDTVERGRDVHSVLEQYAKFVKPAFDDFILPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHNLCKIYPNLNVIQSTFQIRGMHTLIRDREISKHDFIFYSDRLIRLVVEHGLGYLPFTEKQVITPTGSIYIGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDETQLIYEKLPKDISERHVLLMDPVLGTGNSASQAIELLIKKGVPESRIIFLNLVSAPEGIDCVCKRFPQLKVVTSEIEEGLNEQIHVVPGLGEFGDRYFGTDDL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01146 446 PANTHER URIDINE KINASE 14 442 - -
Car07g01146 446 CDD UMPK 27 225 IPR000764 -
Car07g01146 446 Pfam Uracil phosphoribosyltransferase 243 443 - -
Car07g01146 446 Gene3D - 21 228 IPR027417 -
Car07g01146 446 TIGRFAM udk: uridine kinase 22 225 IPR000764 -
Car07g01146 446 Gene3D - 229 443 IPR029057 -
Car07g01146 446 PANTHER URIDINE KINASE 14 442 - -
Car07g01146 446 ProSiteProfiles UvrC family, homology region profile. 113 214 IPR001162 GO:0009381
Car07g01146 446 Pfam Phosphoribulokinase / Uridine kinase family 27 213 IPR006083 GO:0005524|GO:0016301
Car07g01146 446 SUPERFAMILY PRTase-like 228 444 IPR029057 -
Car07g01146 446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 218 IPR027417 -
Car07g01146 446 MobiDBLite consensus disorder prediction 1 22 - -
Car07g01146 446 PRINTS Uridine kinase signature 25 42 - -
Car07g01146 446 PRINTS Uridine kinase signature 55 66 - -
Car07g01146 446 PRINTS Uridine kinase signature 100 115 - -
Car07g01146 446 PRINTS Uridine kinase signature 157 167 - -
Car07g01146 446 PRINTS Uridine kinase signature 171 182 - -
Car07g01146 446 PRINTS Uridine kinase signature 193 206 - -
Car07g01146 446 CDD PRTases_typeI 298 416 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01146 Car-Chr7 10231706 10237022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01146 1 445 PRT Gene Family AT3G27190 76.483 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01146 K00876 - gmx:100816209 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01146 07 10231706 10237022 Car07g01146 07 10231706 10237022 ECH