Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01140 ATGGAAGACTCTGTCCAACGCAGGATGGAGCAATTTTATGAAGGTTCAGATGGACCACCCCTCCGAGTGCTTCCTATTGGTGGGTTGGGTGAAATTGGGATGAATTGCATGCTTGTTGGGAACTACGATCGTTATATCCTCATCGATGCCGGTGTCATGTTTCCAGGCTATGAAGAACTTGGAGTCCAAAAGATAATACCTGATACAACATTTATTAAAAAGTGGAGCCACAAGATTGAAGCTGTAGTTATAACACACGGTCATGAAGATCATATTGGTGCACTGCCTTGGGTCATCCCAGTGCTGGATTCTCATACACCAATTTTTGCTTCATCATATACAATGGAGCTTATAAAAAAACGTTTGAAGGATCATGGTATTTGTGTTCCATCCCGACTAAAACTAATTAGAACAAGGAAGAAGTTTGTGGCTGGGCCATTTGAGATAGAGCCTATCACAGTGACCCATTCTATTCCAGATTGCTGTGGATTAGTTCTTCGATGTTCTGATGGTAATATTCTTCATACTGGGGATTGGAAGATTGATGAAACACCATTAGATGGTAAAATTTTCGACCGCGAAGCTCTAGAGGAACTCTCCAAAGAAGGTGTCACATTGATGATGAGCGATTCAACAAATGTACTCTCACCAGGAAGGACAATGAGTGAGTCTGTTGTTGCTGATGCATTAGTGAGGCATATTTCAGCTGCTAAAGGAAGGGTTATATTAACCCAGTTTGCGTCAAATATTAATCGTCTTAGAAGTGTGAAAGCTGCTGCTGATTTGACTGGCAGAAAGTTGGTATTTGCTGGCATGTCTTTGAGGACGTATTTGGATGCAGCTTGGAAGGATGGAAAGGTTCCAATTGATCCATCCACTCTGGTGAAAACAGAGGATATTGATGCTTATGCGCCTAAGGATTTGCTGATTGTAACAACGGGTTCTCAAGCAGAACCACGTGCTGCCTTGAATCTTGCATCTTATGGAAGTGGTCATTCTTTCAAATTGACAAAGGAAGACGTTGTGTTGTATTCAGCTAAGGTTATCCCCGGTAATGAGTCTCGTGTTATGGAAATGCTAAACCGCATATCAGAGATTGGGCCAACCATAGTCATGGGAAAGAATGAATGTCTGCACACATCTGGTCATGGGTATCGTGGTGAACTGGAGGAAGTGCTTAGAATTGTGAAGCCACAACATTTTCTTCCCATACATGGAGAGCTCTTGTTCTTGAAGGAGCATGAATTACTTGGAAAATCAACTGGAATTCAACACACTGCTGTTATTAAGAACGGAGAAATGCTTGGCGTTTCACATTTGAGAAATAGAAGAGTCCTTTCTAATGGGTTTATTTCACTTGGAAAAGAGAATTTGCAGTTGAACTATAGTGATGGTGACAAAGCATTTGGTACATCAAGTGAACTCTTCATTGAAGAAAGATTGAGAATCGCTTTAGATGGCATCATTGTGGTTAGCATGGAAGTATGTCGCCCTCAAAACTTAGACAGTTCAGTTGAAAACACCTTAAAAGGAAAGATAAGGATTACCACAAAATGCCTATGGCTTGACAAAGGGAAGCTGTTGGATGCACTCCATAAAGCTGCCCATGCTGCTCTTTCAAGCTGCCCTGTAAACTGCCCACTGGGACACATGGAAAAAACTGTGTCTGAGTTGTTGAGGAAAATGGTGAGGAAGTATAGTGGCAAACGGCCTGAAGTTATTGCCTTTGCTATAGAAAATCCTGCAGCTGTTATCGCTAGTGAGATAAACACAAGGTTGTCTGGTAAATCCCATGTAGGTGGGTTATCAACATTTAGAAATGCAGTGCATCAACACAGGAAAGAAAATCAATCCACCAAAATGCAAATGAGAGATGATGATAATGATGTTGAAGGTCTTCTACCTAAGGAAGATGCCACTACCTCAAATGGAGCTTCCAGCGGTTATGTTCCACGAATGAAGTCCCAGATGAAGAATGATGGTCCTGACGATGCTGAAGAATGTCAGTCTGAAAAGTCATCAAATTCTGAAGCCAAACCTTCCAAATTAGTGAAGAGAAACAAATGGAAAGAGGAGGAAGTTAAGAAGTTGATTGGTGTGCGCGGGGAATTGAATGTCATATTTCAATTTGTGAAGGGCAAAAATGTTCTTTGGGAAGAAATATCCAAGAACTTGTTGGCTTATGGGATCAACAAAAATCCCGGACAGTGTAAATATATGTGGACATCTTTGTTACAGAAATATGAGGAGATCAAGAATGAGAAGAACAGAGAGGAAAGATGGCTATATCTGGAGGACATGGAAAGGGTTCTATCTGATAACGAGGCACTAGCCAAAATATAA 2343 0.4119 MEDSVQRRMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGVMFPGYEELGVQKIIPDTTFIKKWSHKIEAVVITHGHEDHIGALPWVIPVLDSHTPIFASSYTMELIKKRLKDHGICVPSRLKLIRTRKKFVAGPFEIEPITVTHSIPDCCGLVLRCSDGNILHTGDWKIDETPLDGKIFDREALEELSKEGVTLMMSDSTNVLSPGRTMSESVVADALVRHISAAKGRVILTQFASNINRLRSVKAAADLTGRKLVFAGMSLRTYLDAAWKDGKVPIDPSTLVKTEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSGHSFKLTKEDVVLYSAKVIPGNESRVMEMLNRISEIGPTIVMGKNECLHTSGHGYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIQHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLNYSDGDKAFGTSSELFIEERLRIALDGIIVVSMEVCRPQNLDSSVENTLKGKIRITTKCLWLDKGKLLDALHKAAHAALSSCPVNCPLGHMEKTVSELLRKMVRKYSGKRPEVIAFAIENPAAVIASEINTRLSGKSHVGGLSTFRNAVHQHRKENQSTKMQMRDDDNDVEGLLPKEDATTSNGASSGYVPRMKSQMKNDGPDDAEECQSEKSSNSEAKPSKLVKRNKWKEEEVKKLIGVRGELNVIFQFVKGKNVLWEEISKNLLAYGINKNPGQCKYMWTSLLQKYEEIKNEKNREERWLYLEDMERVLSDNEALAKI 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01140 780 MobiDBLite consensus disorder prediction 657 684 - -
Car07g01140 780 Gene3D - 222 372 IPR042173 -
Car07g01140 780 MobiDBLite consensus disorder prediction 605 684 - -
Car07g01140 780 ProSiteProfiles Myb-like domain profile. 681 745 IPR001005 -
Car07g01140 780 CDD GT1 687 752 - -
Car07g01140 780 SMART Lactamase_B_5a 33 230 IPR001279 -
Car07g01140 780 MobiDBLite consensus disorder prediction 608 634 - -
Car07g01140 780 Pfam Beta-lactamase superfamily domain 44 183 IPR001279 -
Car07g01140 780 Gene3D - 689 750 - -
Car07g01140 780 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 647 779 - -
Car07g01140 780 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 1 648 - -
Car07g01140 780 PANTHER RIBONUCLEASE J 1 648 - -
Car07g01140 780 PANTHER RIBONUCLEASE J 647 779 - -
Car07g01140 780 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 376 414 IPR011108 -
Car07g01140 780 SUPERFAMILY Metallo-hydrolase/oxidoreductase 21 435 IPR036866 -
Car07g01140 780 Gene3D - 25 437 IPR036866 -
Car07g01140 780 SMART sant 685 747 IPR001005 -
Car07g01140 780 CDD RNaseJ_MBL-fold 24 435 - -
Car07g01140 780 Pfam Myb/SANT-like DNA-binding domain 686 769 IPR044822 -
Car07g01140 780 MobiDBLite consensus disorder prediction 639 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01140 Car-Chr7 10175458 10185597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01140 688 772 Trihelix Transcription Factor Family AT2G38250 32.955 1.60e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car07g01140 Lactamase_B_2 1.2e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01140 - - cam:101513472 1531.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01140 07 10175458 10185597 Car05g01634 05 61104107 61110569 PCT