Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01136 ATGGCGGCAGGGAGACAAAGTGTTTTGGGGAAGAGAGAATCTTACGAACATGGTTCCGTCAAGGAATTTGGTTACTGTAAGAATGATTCTTTCAGAAAAGAGGATAGAGAAGAAGGTGAGATCCTTGTTGACGGAGATGAAGTTTTACTACCGTCGGAAAAGAGAAGAAAATTCTCTCCCGTTATATGGGATTTGGCAGAGAAGGATTCGAAAATCTCTCTCAAAGATAAGGTCAATCATGCAGCGAAGTCTCTATATCGATCACCCGTGGATGAACAATGTCCTGAAGGCAATGGTGTTTTAGGCGCGTCTTCAGAGAATTCCTCTGGTTTGGATGAAGAAAGTGATATGCAGGGATGGAACATCATGAAGTCAAGATGGGCCTCTGATGGTCTTTCACCTATTGGTGATGATGATAAATACAAGCAACACAGAGACAGCTCAAGTTCAGAAGTTGGTGGTTGTTCGGGTAGCACAATTGCTAGATCCGATGTTGATGAAGAAGTTTGTGATTCTCCATCAAATTCATCTGAAGATGGTGGTTTTATGCTCGGACAGAGAAACTTTAACATGTGTCAAAGTTGCAGAAGTGTGTCGGAGTTTGAAATGATTAACAAAATAAATGAAGGAACTTATGGTGTTGTTTACAAAGCTAAGGATAAGAAGACTGGAGAGATTGTAGCACTGAAGAAGGTTAAGATGAACATAGAGAGGGAGGGTTTTCCAATGTCAGCATTGAGAGAAATGAATATTCTCTTGTCTTTAAATCATCCCTCAATTGTGGATGTTAAAGAAGTAGTTGTGGATGATGAAGATTGCGATGATGGTACTTATATGGTGATGGAGCATATGCAGTATGACCTTAAGCAGTTAATGGAGGTAAAGACACAGCCTCTTAGTATTGGCGAAATAAAATCCTTCATGAAGCAACTTCTTGAAGGTGTGAAGTATCTCCATGACAACTGGATTCTCCATAGGGATTTGAAGACGTCTAACATTTTGCTGAATAAAGACGGACAGCTGAAAATATGCGACTTTGGAATGTCAAGGCAGTATGGAAGCCCTCTGAAGCCGTATACACCTCTTGTTGTTACATTATGGTACAGAGCACCTGAACTTTTGTTGGGCGCTAAAAAATACTCAAAGGCAATTGATATGTGGTCGGTTGGTTGCATAATGGGCGAATTATTTTCCAAGGTGCCACTTTTCAAAGGCAAAACTGAAATTGAACAACTTGATAAGATTTTTCGAACTCTTGGTACACCAGATGAGAAAATTTGGCCAGGATTATCCAAATTGCCTGGGTCTAAAGCAAATTTTGTTAAGCAACGGTGTAGTATGCTAAGGATGAAGTTTCCGGCCGCATCTTTCACTGGTTTGCCAGTTTTGTCCGAGTTGGGATATGACTTGTTGAATAAACTTCTAGCTTATGATCCTGAAAAGAGGATAACTGCAGAAGCTGCTCTGCAACATGATTGGTTTCTTGAAGGCCAACTTCCCAATTCTGATTACAAGCCTATTTTTTCTTCATGGCAGTGCTAG 1542 0.4047 MAAGRQSVLGKRESYEHGSVKEFGYCKNDSFRKEDREEGEILVDGDEVLLPSEKRRKFSPVIWDLAEKDSKISLKDKVNHAAKSLYRSPVDEQCPEGNGVLGASSENSSGLDEESDMQGWNIMKSRWASDGLSPIGDDDKYKQHRDSSSSEVGGCSGSTIARSDVDEEVCDSPSNSSEDGGFMLGQRNFNMCQSCRSVSEFEMINKINEGTYGVVYKAKDKKTGEIVALKKVKMNIEREGFPMSALREMNILLSLNHPSIVDVKEVVVDDEDCDDGTYMVMEHMQYDLKQLMEVKTQPLSIGEIKSFMKQLLEGVKYLHDNWILHRDLKTSNILLNKDGQLKICDFGMSRQYGSPLKPYTPLVVTLWYRAPELLLGAKKYSKAIDMWSVGCIMGELFSKVPLFKGKTEIEQLDKIFRTLGTPDEKIWPGLSKLPGSKANFVKQRCSMLRMKFPAASFTGLPVLSELGYDLLNKLLAYDPEKRITAEAALQHDWFLEGQLPNSDYKPIFSSWQC 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01136 513 SMART serkin_6 201 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01136 513 Gene3D Transferase(Phosphotransferase) domain 1 286 505 - -
Car07g01136 513 Pfam Protein kinase domain 202 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01136 513 ProSiteProfiles Protein kinase domain profile. 201 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01136 513 PANTHER CYCLIN-DEPENDENT KINASE 157 512 - -
Car07g01136 513 MobiDBLite consensus disorder prediction 133 159 - -
Car07g01136 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Car07g01136 513 MobiDBLite consensus disorder prediction 133 147 - -
Car07g01136 513 MobiDBLite consensus disorder prediction 100 115 - -
Car07g01136 513 CDD STKc_CDC2L1 195 494 IPR045267 GO:0004674|GO:0005524|GO:0006468
Car07g01136 513 Gene3D Phosphorylase Kinase; domain 1 185 285 - -
Car07g01136 513 SUPERFAMILY Protein kinase-like (PK-like) 193 497 IPR011009 -
Car07g01136 513 PANTHER CELL DIVISION PROTEIN KINASE 157 512 - -
Car07g01136 513 MobiDBLite consensus disorder prediction 90 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01136 Car-Chr7 10143823 10145803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01136 196 500 Core Cell Cycle Gene Families AT5G10270 46.855 1.79e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Car07g01136 Pkinase 1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01136 K08818 - gmx:100788840 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01136 07 10143823 10145803 Car07g01136 07 10143823 10145803 ECH