Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01132 ATGTCCCCATCACTTTATAACCCTACCTTCAAAAATGAATTAGTAGAATATAACAACATCAATGATCAAAATGAAAATCCATTAATGGGTTCTTGTTATGCTTTATATCCCAATTTTCCCATTTTGGAAAACATTGCTAATTCAACATGGATTCTTCCATTTCCATTTTCTTCTTCTGATCATGAAACTGAAACCATTCATAATAGGGATCACAAGAAATTGAAGAGAACCATAacaactactactactactaATTTCCATAACAGTAGTGTGAATAGCATTCCAAGGCTTCATTTCAGAGATCATATAAGAACTTATAAACAAAGATATTTTGCTGCTGAAGCTGTTGAAGAAGCAGCACAAGAACACTTGAAGTTCATCGATAATAATCCCGATGATTTCGAAGAAGATGGTGGTTGTGCTGATGGAATGAGACTAGTTCAACTTCTAATTGCTTGTGCTGAAGCTGTAGCATGTCGTGACAAATCACATGCTTCAATCTTATTATCTGAGCTTAAATCAAATGCTTTGGTTTTTGGATCATCGTTCCAAAGAGTTGCATCTTGTTTTGTTCAAGGGTTAACAGAGAGATTAACAATGATTCAACCAATTGGGTCAGTTACAAAATCCATGATGAACATAATGGATGCAGCATCAGAAGAAATGGAAGAAGCATTCAAATTGGTTTATGAGATTTGTCCACATATTCAATTTGGACACTTTGTTGCTAATTCCATAATATTGGAAGCCTTTGAGGGTGAGAGTTTTGTTCATGTTGTCGATCTCGGTATGAGCCTTGGTCTACCACATGGACACCAATGGCGAGGTCTAATTCGAAGCCTTGCGAGTCGTAGCAGCCAACGTGTTCGGCGACTTAGGATCACAGGGGTTGGCCTATGCATTGCTAGAATCCAAGTCATTGGTGAAGAACTCTCAGTTTATGCAAACAATTTGGGGATTCATTTGGAGTTTTCAATTGTTGACAAGAATCTGGAAAATTTGAAACCTGAAGATATTAAAGTGAATGAAAAAGAGGTTCTTGTTGTTAACAGCATTCTTCAGCTTCATTGCGTTGTTAAGGAAAGTCGCGGCGCGTTGAATTCTGTTTTACAAATGATTCATGGTCTTTCACCTAAAGTTTTGGTTATGGTTGAACAAGATTCTGGTCACAATGGACCTTTTTTTCTTGGAAGGTTTATGGAATCATTGCATTATTATTCTGCTATTTTTGACTCATTGGATGCTATGTTACCAAAGTATGATACCAAGAGGGCAAAAATGGAGCAGTTTTATTTTGCTGAGGAGATAAAGAACATTGTGAGCTGTGAAGGACCATTGAGGATGGAGAGGCATGAGAAAGTTGATCAGTGGCGTAGGAGAATGAGTAGAGCTGGATTTCAAGGTGTGCCTATTAAGATGATGAGTCAAGGTAAAGAATGGCTTGTGAAGAATAAGGTTTGTGATGGATATACTGTTGTAGAAGAGAAAGGGTGTTTGGTTCTTGGATGGAAATCTAAGCCTATTGTTGCAGCTTCTTGCTGGAAATGCTGA 1551 0.3714 MSPSLYNPTFKNELVEYNNINDQNENPLMGSCYALYPNFPILENIANSTWILPFPFSSSDHETETIHNRDHKKLKRTITTTTTTNFHNSSVNSIPRLHFRDHIRTYKQRYFAAEAVEEAAQEHLKFIDNNPDDFEEDGGCADGMRLVQLLIACAEAVACRDKSHASILLSELKSNALVFGSSFQRVASCFVQGLTERLTMIQPIGSVTKSMMNIMDAASEEMEEAFKLVYEICPHIQFGHFVANSIILEAFEGESFVHVVDLGMSLGLPHGHQWRGLIRSLASRSSQRVRRLRITGVGLCIARIQVIGEELSVYANNLGIHLEFSIVDKNLENLKPEDIKVNEKEVLVVNSILQLHCVVKESRGALNSVLQMIHGLSPKVLVMVEQDSGHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHEKVDQWRRRMSRAGFQGVPIKMMSQGKEWLVKNKVCDGYTVVEEKGCLVLGWKSKPIVAASCWKC 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01132 516 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 62 515 IPR005202 -
Car07g01132 516 PANTHER DELLA PROTEIN RGL1-LIKE 62 515 - -
Car07g01132 516 Pfam GRAS domain family 146 515 IPR005202 -
Car07g01132 516 ProSiteProfiles GRAS family profile. 137 515 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01132 Car-Chr7 10085814 10087696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01132 143 515 GRAS Transcription Factor Family AT1G66350 37.931 1.09e-77 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car07g01132 GRAS 1.4e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01132 - - gmx:100813548 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01132 07 10085814 10087696 Car07g01132 07 10085814 10087696 ECH