Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01122 ATGGCGAATTCGGAAGAGGTTTTTCCATGGCTAAAATCTCTTCCGGTAGCGCCAGAGTATCGACCTAGCATAGCAGAGTTTCAAGATCCAATCGGTTACATTTTCAAGATCGAAAAGGAAGCTTCAAAATACGGAATCTGCAAAATCATTCCACCGGTTTCACCTTCTTCTAAAAAAACCGCAATTTCAAACATGAACCGGTCTCAACCCCGGTTCACAACACGTCAACAACAGATCGGGTTCTGTCCACGGAAACCCCAACCGGTTCGACGACCGGTATGGCACAGCGGTCACCACTATTCCCTCCGCGAATTCGAAGCTAAAGCAAAATCATTCGAGAAAAGTTACTTCAAAAAGGGGAAAAAACTCTCTCAACTTTCGCCTCTTGAAATTGAGACTATTTACTGGAAAGTCACTGCTGATAAACCGTTTTCAGTTGAATACGCAAACGACATGCCTGGTTCTGCGTTTGGAGTGTTAAACGACGGTGGTTATGGTGGAGATGGTGTTTTAACGGTTGGTGAAACTGGTTGGAATATGAGAGGGGTTTCGAGGGCAAATGGGTCATTGTTGAGGTTTATGAAAGAAGAGATACCTGGTGTTACTTCTCCTATGGTTTATGTTGCTATGTTGTTTAGTTGGTTTGCTTGGCATGTTGAGGATCATGATTTGCATAGTTTGAATTATCTTCATATGGGTGCTTCTAAGACTTGGTATGGTGTTCCTAGAGATGCTGCTGTTGCTTTTGAGGATGTTGTTAGAGTTCATGGATATGGAGGAGAGATTAATCCTCTTGTGACTTTTGCTATTCTTGGTGAGAAAACTACAGTGATGTCCCCTGAAGTATTCGTTGGGGCAGGTATTCCATGCTGCAGATTAGTGCAAAATGCTGGGGAGTTTGTTGTGACATTTCCAAGAGCCTATCACACTGGATTCAGTCACGGTTTTAATTGTGCAGAGGCAGCTAACATTGCAACACCTGAATGGTTGAAGGTTGCTAAAGATGCTGCTATTCGGAGGGCTTCAATTAATTACCCTCCCATGGTTTCACATTCCCAGTTACTTTATGACCTTGGCCTTGCTCTATGTTCTAGAGTCTCTGGAGGCATCAGCGTTGGACCACGGAGTTCTCGACTTAAAGATAAGAAGAGAAAGGGTGTAGGAGAGACTGTAATTAAAGAACTATTTGCACGGGATGTGTTACATAATAACGACCTACTGCATGCACTTGGCAAAGGAGCTTCTGTAGTACTTCTTCCTCGTAGCTCTTCTGATGACTTATCTGTTTGCACAAAATTACGTGTTGGATCTCAACAACTAAAATTGAACACTGAGTTTTCTCTCAACGTGTGCAATTCTGAGGGAAGTAATTCCTCAAAAAGTTTCATTTCAGATGATCTAGTGTTCAACAGGAATCATGGAATAAAAAAAGTAAAAGGTTTTTCTTCTGTAAAAGAAAAGTTTGCTACATTGTGTGAAAGGAACAGGGTGTGTTCATTCGGTGAAAATGGTGACACGTGTACTTCAAGTTCAAAAACACTGCAAAGAGACATCGAAAATGATACAAATCAAGGAGATGCGTTATCAGACCAGAGACTATTCTCATGTGTTACATGTGGAATATTATGTTTTTCCTGTGTAGCTATTGTACAGCCTAGACAACCAGCTGCTAGATACCTTATGTCAGCTGATTGTAGCTTCTTTAATGATTCGATAGTTGGTTCTGGAGTTGCTAGAAATATGTTTACTGTTGCCCATGAAGATGCATATATTTCCAAGCAGAGCACATATACAGGATGGACAAAACAGAATGCCAGAAATGATTTATATGATGTTCCTGTTGAATCTGTTGAACAACGGACACAAATTGCTGATCAAAATTATATTGAAGCTTCAAATATTGAAAGAAAAAAAGGCAACACAGCTCTTGCATTGTTGGCTTCGGCATATGGAAATTCGTCCGACTCCGAGGACGATCAAGGTGACTCGGATATTGCAGTTGATGGCAATGATTTGAACACAATGAAGCATCCATCAGAAAGTAAATCCCAGGAGAAATCGTGTTTGCCTTCTCATTTTCAAGATTGCCAGGCTAGTCCAGTGAATAGTATTAACAATTATGAGTATTATATGCATAAGAAAGTTGAGCGCATTATGAGTTCTTTTGACTACTCTGTTAAGTCAGAAGATTATGACGTCACATCAGGGGTAGCATTCAAAAATACTAGGGAAGGATTTCATCCCACCTTGAATTGTTCCGAAGATACTCATACTGAAATGCCCTTGTTGAGCAAGACTGTGATTCCGATTGAGAATAAAACATTGGTGCCGCCATGTGATGAAGACTCATCTAGGATGCATGTCTTCTGTCTAGAGCATGCTGCAGAAGCAGAGCGGCAACTTCGCCCATTTGGAGGAGCACATATATTGCTCCTATGCCATGCAGATTATCCAAAGATAGAGGCTGAAGCGAAGTTTGTGGCTGAAGAAATGGGAATCGATTATGAGTGGAAGAATACTGTTTACAGGCATGCCGAAAGGGAAGATGAGGAGAGGATCCAATCAGCTCTGGATAGCGAGGAGGCTATTCCTGGAAATGGTGACTGGGCTGTAAAGCTGGGAATCAATCTCTTTTATAGTGCCAATCTTAGCCGGTCTCCACTTTATAGTAAGCAGATGCCTTACAATTCTCTTATGTATTATGCATTTGGCCGTAGCTCTCCAGTAAACTTGCCCATAGAGCCCAAGGTCTGTCAGAGAAGGACAAAGAGGCAGAAAAAGGTAGTTGCTGGGAAGTGGTGCGGAAAAGTTTGGAAGTCCAATCAGATCCATCCCCTTTTAGCAAAAAGAGAGCTTGAAGATGTTCAGGATGAGAAAAGCTTACATGGGTGGCCATTACCTGATGAGAAAAGCGAGGTATCGGAACGTACCCACAAAAGCAATACTACAAATAGAAAATCTGGTAGGAAAAGGAAAATGACCATAGAGAATGAAGGAGCTTGGGAAGGAAGTTCTGCTGAAGGGGATTGGCTTACGGATTATTCAATCGAAGATAAATGCAATCGATCTCAAAGGAGGGCTCTTGCAAGTAAGCGAACCAGGCATATTGAGAGAGATAGTACTGCTTCAGAAGGGGATTCTTCTCCTTTGAAGCATCATAAAAAGCATACAAGTAAGCATACAAAATGCATGGAAAGTGATATAGTTTCAGATGACTCGCCAGATGATAATACTCATATACAACAGTGGAGGAAGTCTGTTGCTAAGGAAGCTAAATCTATTGACTGTGATATGGTTTCAGATGATACAATGGACCATGCTTCTGATTGGCCACATAGTGAAGAGCTTAGTCACAAGCAAGATGTTTCAGAGGATTCATTGGGTGTCGATTCTCTTCAGCAGCATAGGAAGACTCCTAAAAGCAATTTTGACCAATACATTTCTGAAGAAGATGTGATTTCTGATGGCCAAACAGAGGTTCATTTTCAGAACCAAAAATGGAGGATATCTAAAAACGGGCAACACAAATATCTTTCTGAAGAAGATGCAGTGATATCTGATGACCAACTGGAGCACAGCATGCTGAAGCAACAACTAAGGAATCCTAATAGCAGGAAAGAGCTAGATAATTACCATGTTGAAGAGGATATTATATCTGAAGACGAACTGGAATGCCATTCTCGCAAGTATCAAAGAAGGACTCCGAAAGACAAGCAAGCCAAACATGTCATTGGGGAAGATGTAACATGTGATGACCAGTTGGAGGATCACTTTCAGAAGCCCCGAAGGAGTATTCGTATGAGGAAGAAAAATAGACACAGTGATGAAGAAGTTATGGATGACTCAGCGGAAAATAATTCTCATGTGCTGCATAGAACTCCTAAAAGGAAGCAAGCTAAATGCACAGATGAAGACAATATCAACTCAGATGATCGGATGGAGGATGATTGTCATCAGCAACACAGTAGACCTCTTCGAAGTAAGCAAACTAAATCACAAATTCTTCAACAAATGAAACAGTCTAACTCGCTTTGTGTGAGAAGCAAGACATCTCGGCCTGTGAAATGTGGTTCTCATATGCTAACAAAGTCGAAGTCTCCTCGGCTAATGAAGCAGCAGCCTCGTGTGTGGAACAGTCAATCAGGTAACTCCAAAGATGAGATGTCCCAAATTGAAGATGATGAAGGTGGCGGACCTCCCAGCACACGTCTTAGGAAAAGATTCCTAAAAGTTCAAAGTGAATCCGAGGGGAAAACAACAGAAAGGGAAACCAAAAAGAAAAAAGTGAAGAATGCAATAGCTGCAAAAGTTTCAGCAGTCCGTGCCAAAATGAAGGATGACGAAGAAGAATACCAGTGTGACATTGAGGGGTGCACCATGAGTTTTGGGTCTAAACAGGAGTTGGTGCATCATAAGAGAAATATATGTCCTGTGAAAGGGTGTGGAAAGAAGTTTTTCTCACACAAATATCTGGTGCAGCATCGTCGAGTTCACGAGGATGACCGTCCCTTAAAGTGTCCTTGGAAGGGGTGCAAGATGGCTTTCAAATGGGCATGGGCTCGTACTGAACATATCCGTGTCCACACCGGTGCTCGTCCGTATGTGTGTGCTGAGCCGGGGTGTGGGCAAACGTTCAGGTTTGTTTCTGATTTCAGTCGTCATAAGCGAAAAACTGGTCATTCAGTAAAGAAGACTCGTTCATAG 4704 0.4192 MANSEEVFPWLKSLPVAPEYRPSIAEFQDPIGYIFKIEKEASKYGICKIIPPVSPSSKKTAISNMNRSQPRFTTRQQQIGFCPRKPQPVRRPVWHSGHHYSLREFEAKAKSFEKSYFKKGKKLSQLSPLEIETIYWKVTADKPFSVEYANDMPGSAFGVLNDGGYGGDGVLTVGETGWNMRGVSRANGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPRDAAVAFEDVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFVGAGIPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCAEAANIATPEWLKVAKDAAIRRASINYPPMVSHSQLLYDLGLALCSRVSGGISVGPRSSRLKDKKRKGVGETVIKELFARDVLHNNDLLHALGKGASVVLLPRSSSDDLSVCTKLRVGSQQLKLNTEFSLNVCNSEGSNSSKSFISDDLVFNRNHGIKKVKGFSSVKEKFATLCERNRVCSFGENGDTCTSSSKTLQRDIENDTNQGDALSDQRLFSCVTCGILCFSCVAIVQPRQPAARYLMSADCSFFNDSIVGSGVARNMFTVAHEDAYISKQSTYTGWTKQNARNDLYDVPVESVEQRTQIADQNYIEASNIERKKGNTALALLASAYGNSSDSEDDQGDSDIAVDGNDLNTMKHPSESKSQEKSCLPSHFQDCQASPVNSINNYEYYMHKKVERIMSSFDYSVKSEDYDVTSGVAFKNTREGFHPTLNCSEDTHTEMPLLSKTVIPIENKTLVPPCDEDSSRMHVFCLEHAAEAERQLRPFGGAHILLLCHADYPKIEAEAKFVAEEMGIDYEWKNTVYRHAEREDEERIQSALDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSLMYYAFGRSSPVNLPIEPKVCQRRTKRQKKVVAGKWCGKVWKSNQIHPLLAKRELEDVQDEKSLHGWPLPDEKSEVSERTHKSNTTNRKSGRKRKMTIENEGAWEGSSAEGDWLTDYSIEDKCNRSQRRALASKRTRHIERDSTASEGDSSPLKHHKKHTSKHTKCMESDIVSDDSPDDNTHIQQWRKSVAKEAKSIDCDMVSDDTMDHASDWPHSEELSHKQDVSEDSLGVDSLQQHRKTPKSNFDQYISEEDVISDGQTEVHFQNQKWRISKNGQHKYLSEEDAVISDDQLEHSMLKQQLRNPNSRKELDNYHVEEDIISEDELECHSRKYQRRTPKDKQAKHVIGEDVTCDDQLEDHFQKPRRSIRMRKKNRHSDEEVMDDSAENNSHVLHRTPKRKQAKCTDEDNINSDDRMEDDCHQQHSRPLRSKQTKSQILQQMKQSNSLCVRSKTSRPVKCGSHMLTKSKSPRLMKQQPRVWNSQSGNSKDEMSQIEDDEGGGPPSTRLRKRFLKVQSESEGKTTERETKKKKVKNAIAAKVSAVRAKMKDDEEEYQCDIEGCTMSFGSKQELVHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMAFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSVKKTRS 1567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01122 1567 MobiDBLite consensus disorder prediction 1326 1349 - -
Car07g01122 1567 Pfam jmjN domain 18 51 IPR003349 -
Car07g01122 1567 MobiDBLite consensus disorder prediction 1024 1079 - -
Car07g01122 1567 MobiDBLite consensus disorder prediction 1270 1323 - -
Car07g01122 1567 ProSitePatterns Zinc finger C2H2 type domain signature. 1506 1528 IPR013087 -
Car07g01122 1567 ProSiteProfiles Zinc finger C2H2 type domain profile. 1504 1533 IPR013087 -
Car07g01122 1567 ProSitePatterns Zinc finger C2H2 type domain signature. 1476 1498 IPR013087 -
Car07g01122 1567 MobiDBLite consensus disorder prediction 1407 1427 - -
Car07g01122 1567 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 1175 1557 - -
Car07g01122 1567 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 4 1075 - -
Car07g01122 1567 SMART JmjN_1 16 57 IPR003349 -
Car07g01122 1567 ProSiteProfiles JmjN domain profile. 17 58 IPR003349 -
Car07g01122 1567 MobiDBLite consensus disorder prediction 1060 1079 - -
Car07g01122 1567 ProSiteProfiles Zinc finger C2H2 type domain profile. 1534 1565 IPR013087 -
Car07g01122 1567 MobiDBLite consensus disorder prediction 1259 1427 - -
Car07g01122 1567 MobiDBLite consensus disorder prediction 961 1005 - -
Car07g01122 1567 ProSiteProfiles Zinc finger C2H2 type domain profile. 1474 1503 IPR013087 -
Car07g01122 1567 SUPERFAMILY beta-beta-alpha zinc fingers 1514 1558 IPR036236 -
Car07g01122 1567 Pfam JmjC domain, hydroxylase 205 323 IPR003347 -
Car07g01122 1567 MobiDBLite consensus disorder prediction 961 982 - -
Car07g01122 1567 SMART cupin_9 172 341 IPR003347 -
Car07g01122 1567 MobiDBLite consensus disorder prediction 652 688 - -
Car07g01122 1567 MobiDBLite consensus disorder prediction 1100 1144 - -
Car07g01122 1567 ProSitePatterns Zinc finger C2H2 type domain signature. 1536 1560 IPR013087 -
Car07g01122 1567 MobiDBLite consensus disorder prediction 1024 1051 - -
Car07g01122 1567 Gene3D Classic Zinc Finger 1473 1558 - -
Car07g01122 1567 Gene3D Cupin 10 345 - -
Car07g01122 1567 SUPERFAMILY beta-beta-alpha zinc fingers 1474 1510 IPR036236 -
Car07g01122 1567 PANTHER LYSINE-SPECIFIC DEMETHYLASE 4 1075 - -
Car07g01122 1567 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1175 1557 - -
Car07g01122 1567 SMART c2h2final6 1534 1560 IPR013087 -
Car07g01122 1567 SMART c2h2final6 1451 1473 IPR013087 -
Car07g01122 1567 SMART c2h2final6 1504 1528 IPR013087 -
Car07g01122 1567 SMART c2h2final6 1474 1498 IPR013087 -
Car07g01122 1567 MobiDBLite consensus disorder prediction 1100 1125 - -
Car07g01122 1567 MobiDBLite consensus disorder prediction 1365 1386 - -
Car07g01122 1567 ProSiteProfiles JmjC domain profile. 172 341 IPR003347 -
Car07g01122 1567 MobiDBLite consensus disorder prediction 1126 1144 - -
Car07g01122 1567 SUPERFAMILY Clavaminate synthase-like 188 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01122 Car-Chr7 10023485 10031929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01122 1400 1565 C2H2 Transcription Factor Family AT3G48430 65.574 9.20e-67 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car07g01122 JmjC 1.3e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01122 - - gmx:100775813 1957.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01122 07 10023485 10031929 Car07g01122 07 10023485 10031929 ECH
Car07g01122 07 10023485 10031929 Car08g00222 08 1739333 1764521 PCT
Car05g01658 05 61399378 61417306 Car07g01122 07 10023485 10031929 PCT