Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01121 ATGGCGTCCAACGAGGGATTTCTGACTGATGGACAGAGGGAAATGTTGAAAATTGCTAGTCAAAATGCTGAGAATCTGTCGTCATCACCGAAGTCACCATCGTCCTTACTTTCTGATCATCACATCAAAGCCCCTGCTGGTGGTAAGGCTCAAACTGCTGGGATAGCTGTGAGGCATGTCCGACGGTCGCACTCTGGAAAGTATGGGCGGGCGAAGAAGGATGGTGCTGGTGGTAAGGGCACCTGGGGAAAATTGATGGACACAGATGTTGATTCTCACATAGACCGCAATGATCCAAATTATGACAGTGGCGAGGAACCCTATCAGCTGGTTGGATCTACTGTTACTGACCCCTTGGATGAATTCAAGAAAGCAGTGGTATCTCTCATAGAAGAATACTTCAGTAATGGGGATGTAGATTTGGCAGCATCTGATCTCAGAGAACTTGGCTCAAGTGAATATTATCCATACTTCATTAAGCGACTTGTTTCCATGGCAATGGACAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTCTGCTTTCAGCATTGTATGCTGATGTCATTAGTCCCACACAGATTAGGGATGGATTTTTTATGCTTATTGAATCTGCTGATGATCTTGCAGTGGATATCCTGGATGCAGTTGACATCCTTGCTTTATTCCTGGCACGTGCTGTTGTTGATGACATTCTTCCTCCAGCCTTTCTTGCAAGAGCAAGGAAGGCTCTTCCAGAATCTTCCAAGGGAGTTCAGGTAATCCAGACTGCTGAGAAGAGTTATCTCTCAGCTCCACACCATGCAGAACTTGTGGAAAGACGATGGGGTGGTAGCACTCACATTACTGTTGAAGAAGTGAAGAAAAAGATTGCTGATTTACTTCGAGAATATGTGGATAGCGGTGAGACACTTGAAGCCTGTAGATGCATACGTGAGTTGGGAGTTTCTTTCTTCCATCACGAGGTTGTGAAGAAGGCTATGGTACTTGCCATGGAGATTCCTTCTGCAGAACCTCTACTGTTGAAGCTATTAAAAGAAGCAGCCGAAGAAGGACTAGTAAGTTCCAGCCAAATGGTGAAAGGGTTTTCCCGATTGGCAGAAGGTCTAGATGATCTTGCTCTTGATATTCCATCAGCTAAAGTCTTATTTCAGTCATTTGTCCCCAAAGCAATCTCTGAAGGATGGCTTGATGCTTCCTTTACCAATCCAGCTGGTGAAGATGGGGATTACCAAGTTGAAGATGAGAAAGTGAGGAAGTACAAAAAGGAAGTTGTGACTATAATTCATGAGTATTTTCACTCTGATGACATTCCTGAACTCATTCGAAGTCTAGAAGATCTTGGAGTTCCCGAGTATAACTCAATATTTTTGAAGAAGCTAATAACACTTGCAATGGACCGAAAGAACAGAGAAAAGGAAATGGCATCTGTTTTGCTATCTGCACTTCATATAGAGATATTCTCAACGGAGGATATAGTTAATGGTTTTGTCTTGCTTCTGGAAAATGCAGAAGATACAACACTGGATATACTGGATGCTTCAAAAGAACTTGCTCTTTTCTTAGCTCGGGCTGTGATTGATGATGTACTTGCCCCATTGAACTTGGAGGAAATTGGCAGCAGGCTACCACCAAAGGGCAGTGGTAGTGAAACTGTGCGTATGGCTCGAACACTCATTGCTGCTCGTCACGCGGGTGAAAGGCTTTTGAGATGCTGGGGTGGGGGAACTGGATGGGCTGTGGAGGATGCTAAGGACAAGATCATGAAGCTCTTGGAGGAGTACGAAAGTGGTGGGGTTGTCAGTGAAGCATGCCAATGTATTCGCGACTTGGGTATGCCTTTCTTCAACCACGAGGTAGTGAAGAAAGCCTTGGTTATGGCCATGGAGAAGAAGAATGATAGGATGCTAGATCTGCTGCAGGAGTGCTTTAGTGAAGGCTTAATCACCATCAATCAGATGACTAAAGGATTCACTCGAATTAATGATGGTCTTGATGATTTGGCTCTGGACATCCCAAACGCAAAGGAAAAATTTGCTTTCTATGTGGAGTATGCCCAGACGAAGGGCTGGCTTCTACCATCATTTGATTCCTCTGCCTCAGATGTGTAA 2109 0.4443 MASNEGFLTDGQREMLKIASQNAENLSSSPKSPSSLLSDHHIKAPAGGKAQTAGIAVRHVRRSHSGKYGRAKKDGAGGKGTWGKLMDTDVDSHIDRNDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSLIEEYFSNGDVDLAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPTQIRDGFFMLIESADDLAVDILDAVDILALFLARAVVDDILPPAFLARARKALPESSKGVQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVDSGETLEACRCIRELGVSFFHHEVVKKAMVLAMEIPSAEPLLLKLLKEAAEEGLVSSSQMVKGFSRLAEGLDDLALDIPSAKVLFQSFVPKAISEGWLDASFTNPAGEDGDYQVEDEKVRKYKKEVVTIIHEYFHSDDIPELIRSLEDLGVPEYNSIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVLLLENAEDTTLDILDASKELALFLARAVIDDVLAPLNLEEIGSRLPPKGSGSETVRMARTLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRINDGLDDLALDIPNAKEKFAFYVEYAQTKGWLLPSFDSSASDV 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01121 702 SMART ma3_7 583 692 IPR003891 -
Car07g01121 702 SMART ma3_7 420 531 IPR003891 -
Car07g01121 702 SMART ma3_7 286 397 IPR003891 -
Car07g01121 702 SMART ma3_7 122 233 IPR003891 -
Car07g01121 702 PANTHER PROGRAMMED CELL DEATH PROTEIN 4-LIKE 1 694 - -
Car07g01121 702 MobiDBLite consensus disorder prediction 1 84 - -
Car07g01121 702 ProSiteProfiles MI domain profile. 582 701 IPR003891 -
Car07g01121 702 SUPERFAMILY ARM repeat 417 575 IPR016024 -
Car07g01121 702 Gene3D - 114 262 - -
Car07g01121 702 Gene3D - 410 563 - -
Car07g01121 702 Gene3D - 272 404 - -
Car07g01121 702 Gene3D - 570 699 - -
Car07g01121 702 MobiDBLite consensus disorder prediction 15 36 - -
Car07g01121 702 Pfam MA3 domain 584 691 IPR003891 -
Car07g01121 702 Pfam MA3 domain 122 233 IPR003891 -
Car07g01121 702 Pfam MA3 domain 286 397 IPR003891 -
Car07g01121 702 Pfam MA3 domain 421 530 IPR003891 -
Car07g01121 702 SUPERFAMILY ARM repeat 579 697 IPR016024 -
Car07g01121 702 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Car07g01121 702 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Car07g01121 702 PANTHER PROGRAMMED CELL DEATH 4 1 694 IPR039778 GO:0045892
Car07g01121 702 SUPERFAMILY ARM repeat 282 403 IPR016024 -
Car07g01121 702 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Car07g01121 702 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01121 Car-Chr7 10016034 10020640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01121 586 682 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 2.19e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01121 - - gmx:100809081 1235.32