Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01120 ATGCAACCTGCATTACCACAAGAAGAGGCTTTTCAAACTTCGAGTTTTTCGACGACCCATTTTCTACGCTATACTATTTCATTCAACGTCGTTTTGCGAGTTTCTGGTTGGCTTGCACTGTTTATAGCGATGGATGGTAGGAGGCATTCTGTGGACGTTCCTATTTCTAAAACTCTTGTAGCACTAAGGAGAGTAAGGTCATTAAGGGATCCTTCAACAAATGGTATTAGCAAGTTATCTCCTTTGATTGATAATGGATGTTGGGAAAATGGGATTTCTTTGAGGTTTCTTAATGCTCCttatgaatgtgattttgatgataataatggttatTTAAGGTCAAAGGGTTTAGATTTTAAGGAACATAGAGGGCATGCTACTACTAAATTTGAAATGAATTGTCACATGATGAACTATTGTGAGGAACATCAACAAGATGATGGAAATAAATCCCCAAAAGAAAGCTGTTGTAGCAACCATGAAGCTAAAGGATTGGATTTGGTTTCCATTAACCCTTCTAGTAATCATTTGAAGGATGAGGAATCATGCTATTTATCAACTGCATTGTCATCACAATTTAGGAGAATAGATCATTCAAAGTCCAACAGAAAGTTACTGCGGAAAAATCGAGTGAAACCTTCTGAATTGACGGGTGATAATGCAAGCTGTATTAGGAGTCCATGCATTTCGGTTGACAATGCTCTATCACCTCATAGTGTCTCAACACATACACCTCAAGACGTTGATGTTGATGTTTTAGTTGATTACCATGGATGTGGAATAAGCTGTTGTTGGTCGAAGTCGCCGAGGTTTAGAGACTCAAATCATTATTCTGAAATGGAAGGCCTTCCTTTGATGTTGCAGCATGCTAATGAGACAGATTTCCTTGAACATAAAAGCATGATACACATTGGTGGTGAAATTAGTCCAACATTAGAAACTCCTAGAAGTTTATCTATGAAATTCAGGCCAAAATCTTTTGATGATTTGATCGGACAAAATGTGGTTGGGAAGTCTCTTTTGAGTGCCATCTGTAGAGGAAGGATACCATCATTTTATCTCTTCTATGGTCCTCGCGGCACGGGCAAGACCTCTGCATCAAGGATATTTGCTGCTGCGCTGAATTGCCTCTCCCTCGAGGAGCAAAAGCCGTGTGGTTTGTGTAGACAATGTGTTTTGTTCTTTTCTGGAAGAAGTAAAGATGTTAAGGAAGTGGACTCTCTGAGAATTAATCGCACAGACAAAGTTAAATCCCTTGTTAAGAATGCATTCACAGCTCCGGTTTCCTCGCGTTTTAAGGTGTACATTATTGATGAGTGCCAGTTATTGAATGGTGAAACATGGATGACTCTTTTGAATAGCCTAGATAGTGTTTCTCAGCAAGTGGTTTTTGTGATGATCACTCCTGATTTGGATAAGCTTCCACGAAGTGTGGTTACCCGAGCTCAAAGGTATCACTTTGCAAAGATTAAAGATGCAGACATTGCAAGTAGATTGAAAAGAATATGTGCTGAAGAGGGTCTTGAATCTGAACAAGATGCTTTGGATTTCATTGCTACTAAATCATGTGGTTCTCTTAGGGATGCAGAAATGATGCTTGATCAGCTTAGTTTGATTGGTAAAAAAATCACAATTTCCTTAGCCTATGAGCTTACTGGTGTCATATCGGATGATGAGTTGCTTGATTTGTTGGACCTATCTTTGTCATCGGACACTTCAAATACGGTTATAAGAGCGCGGGAGCTGTTGAGATCAAGGATAGATCCTTTACAACTTATATCTCAGTTGGCGAATCTTATTATGGACATTCTTGCAGGAAAATGTGAACTTGGTGGTTCTGAAATCAGAAGAAGATTTTTTGACAGGCATGTTTCGGAATCAAGCATGCAGAAACTTAGTCATGCATTGAGAATACTTTCTGATACAGAGAAGCAATTGAGAATTTCTAAGAATCAAACAACATGGTTCACTGCAGCTCTTCTACAGTTGAGCTCTATAGAATATTCATCTGTGGATACCAATGATACCAAGTTGTGTATAAGAGCTGCATCCAATAGAGGTGGTGATTTATGCAGTACATCGTCTACAGGTGAAAGCCTGAAGCAACTTGCTACAAGTCAATGTGATGAGAAGTCATATAAAATAGAAGTACAAGAAGATGACAAAGCAACATTAGATTCCATATGGTATAAAGCTGCAGAGATATGTCAATCTAGAAGGCTCAAGGCTTTTCTCATGAAGCAAGGGAAGTTGTCCTCAGTTTGTATTAACCAAGGTCTTGCAGTTGTGGAGCTGGAGTTCAACCATCGCGCCTATGTAACTCGAGCCGAGAAGTCGTGGAAACAAATTGCAAGTTCTCTGCAGTTCATATTAGGTTGTAACATTGAGCTCAGAATCAACCATGTACCTTGTACATCAGATTCCAAGTATGCTAAGTTGAAAAGGTCATCTTTCAATTTCTTCAATTGTTCGCGCAGAATTCTACGAAAATCACTATCATCCGATGAAAAAGAATGTGAATCAGACTATGCTGATTACACCTCTCAAAAGCCTATGATGATGGACAAAACTCTATCCCGCTCCTCCGATTGCGGATACCATGGAATGGAGGTGGTAACAACTCTAAGAAGCTGTGAAGGGAATTTACTAAGCTCAGGGAAAATAATTCTGAACAGGATTGCAGATCAACAAATTCCAAGGATTTCTTTTTCTAGAGTTGAATCTGTCAAAGAAGAGGGGTACAATTGTGAGCATCTTGCTTCATCAACACTTGATTTAGATCATCGTTCCAACTGTTTTCCTCGAACACTTTGGCTTCATAGAAAATTATCTTCTTCATATGCATCAAAACAGAAGGACTTTTGTTTTATCAATCCTCAAGTACAAATGTTCTGA 2895 0.3865 MQPALPQEEAFQTSSFSTTHFLRYTISFNVVLRVSGWLALFIAMDGRRHSVDVPISKTLVALRRVRSLRDPSTNGISKLSPLIDNGCWENGISLRFLNAPYECDFDDNNGYLRSKGLDFKEHRGHATTKFEMNCHMMNYCEEHQQDDGNKSPKESCCSNHEAKGLDLVSINPSSNHLKDEESCYLSTALSSQFRRIDHSKSNRKLLRKNRVKPSELTGDNASCIRSPCISVDNALSPHSVSTHTPQDVDVDVLVDYHGCGISCCWSKSPRFRDSNHYSEMEGLPLMLQHANETDFLEHKSMIHIGGEISPTLETPRSLSMKFRPKSFDDLIGQNVVGKSLLSAICRGRIPSFYLFYGPRGTGKTSASRIFAAALNCLSLEEQKPCGLCRQCVLFFSGRSKDVKEVDSLRINRTDKVKSLVKNAFTAPVSSRFKVYIIDECQLLNGETWMTLLNSLDSVSQQVVFVMITPDLDKLPRSVVTRAQRYHFAKIKDADIASRLKRICAEEGLESEQDALDFIATKSCGSLRDAEMMLDQLSLIGKKITISLAYELTGVISDDELLDLLDLSLSSDTSNTVIRARELLRSRIDPLQLISQLANLIMDILAGKCELGGSEIRRRFFDRHVSESSMQKLSHALRILSDTEKQLRISKNQTTWFTAALLQLSSIEYSSVDTNDTKLCIRAASNRGGDLCSTSSTGESLKQLATSQCDEKSYKIEVQEDDKATLDSIWYKAAEICQSRRLKAFLMKQGKLSSVCINQGLAVVELEFNHRAYVTRAEKSWKQIASSLQFILGCNIELRINHVPCTSDSKYAKLKRSSFNFFNCSRRILRKSLSSDEKECESDYADYTSQKPMMMDKTLSRSSDCGYHGMEVVTTLRSCEGNLLSSGKIILNRIADQQIPRISFSRVESVKEEGYNCEHLASSTLDLDHRSNCFPRTLWLHRKLSSSYASKQKDFCFINPQVQMF 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01120 964 Gene3D - 311 488 IPR027417 -
Car07g01120 964 CDD AAA 331 481 - -
Car07g01120 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 539 IPR027417 -
Car07g01120 964 PANTHER DNA POLYMERASE III SUBUNIT GAMMA/TAU 140 931 - -
Car07g01120 964 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 317 663 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Car07g01120 964 Gene3D - 491 553 - -
Car07g01120 964 SMART AAA_5 349 492 IPR003593 -
Car07g01120 964 SUPERFAMILY post-AAA+ oligomerization domain-like 560 661 IPR008921 GO:0003677|GO:0006260
Car07g01120 964 Pfam DNA polymerase III, delta subunit 333 490 - -
Car07g01120 964 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 140 931 - -
Car07g01120 964 CDD HLD_clamp_pol_III_gamma_tau 490 553 IPR045085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01120 Car-Chr7 10006005 10011137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01120 308 602 Core DNA Replication Machinery Family AT1G21690 23.232 2.33e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01120 - - pvu:PHAVU_003G207500g 1238.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01120 07 10006005 10011137 Car05g01663 05 61472235 61476763 PCT