Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01118 ATGAATTCCCAAAACTATCCAATCCACTTCCATACCACTCGAACCTTACCCGAATACGATGTCTTCATACACACTTCCGACGGCACACGTATTCCAGCTCACACAAGCATCTTGGCCTCAGTTTCGCCGGTTCTCGAGAACATTATAGATCAACCGCGTAAGCATAGAAGCTCCGAAAGAATAATTCAAATTCACGGCGTTCCTTCCGACGCCGTAACCGCCTTCGTCGGTTGCCTTTACTCATCCAGGTGCACGGAGGATGAGATGGACAAATACGGAATCCACCTACTTGCACTCTCTCACGTGTACAACGTGCCGCAACTGAAACAGAGATGCATCAAAGGCCTTGTTCAACGGTTGACAACAGAAAACGTGGTGGATGTACTTCAACTCGCGAGACTCTGCGACGCACCTGATCTCCGTCTCCGTTGTATGAAGTTACTCACCAATCACTTCAATGCGGTGCAAAAAACCGAAGGATGGAAGTTCCTCACAAAACATGACCCCTGGCTTGAACTCGATATCCTTCAGTTCATGGACGAACGCGAAACGAGGAAAGAGACATCAAGGAGGCATAGGGAGGAGCAAGGGTTGTATTTGGAACTGAGTGAGGCGATGGAGTGTTTGGAGCACATATGTACGGAAGGTTGCACCGACGTTGGGCCTTACCATGTGGAGGTTAACAGAGAGAGGAAACCGTGTAGCAGATTCTCCACGTGTCAAGGTCTCCAGCTTCTGATTCGCCACTTTGCCACGTGTAAGAAGAGGGTGAAGGGAGGGTGCTGGCGTTGTAATCGTATGTGGCAGCTGTTTAGGCTTCACTCTTATGTTTGTCAACAAACCGATTCTTGCAACGTTCCTCTTTGCAGGCAATTTCAATTGAAAATGGAGCAAGAGAAAAGGAAAGATGATCCCAAATGGAAACTACTTGCGAGAAAGGTTGCCTCAGCCAAAGTCATGTTTTCCCTGTCTCTACCTAAGAGAAAGAGAGATGAAGAAATGAGAGTGGCCATAGACAACCAAGGAATAAGATGTTTTGGTTACAATGAATATTGTAACACTGTATTGGACGATCGATGTGTTTCGTGTTGA 1092 0.4698 MNSQNYPIHFHTTRTLPEYDVFIHTSDGTRIPAHTSILASVSPVLENIIDQPRKHRSSERIIQIHGVPSDAVTAFVGCLYSSRCTEDEMDKYGIHLLALSHVYNVPQLKQRCIKGLVQRLTTENVVDVLQLARLCDAPDLRLRCMKLLTNHFNAVQKTEGWKFLTKHDPWLELDILQFMDERETRKETSRRHREEQGLYLELSEAMECLEHICTEGCTDVGPYHVEVNRERKPCSRFSTCQGLQLLIRHFATCKKRVKGGCWRCNRMWQLFRLHSYVCQQTDSCNVPLCRQFQLKMEQEKRKDDPKWKLLARKVASAKVMFSLSLPKRKRDEEMRVAIDNQGIRCFGYNEYCNTVLDDRCVSC 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01118 363 CDD BACK 121 168 - -
Car07g01118 363 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Car07g01118 363 SUPERFAMILY TAZ domain 194 293 IPR035898 -
Car07g01118 363 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 9 347 - -
Car07g01118 363 SMART TAZ_2 196 290 IPR000197 -
Car07g01118 363 Pfam BTB/POZ domain 20 118 IPR000210 GO:0005515
Car07g01118 363 SMART BTB_4 19 120 IPR000210 GO:0005515
Car07g01118 363 Gene3D - 121 191 - -
Car07g01118 363 Gene3D TAZ domain 192 318 IPR035898 -
Car07g01118 363 Gene3D Potassium Channel Kv1.1; Chain A 9 120 IPR011333 -
Car07g01118 363 Pfam TAZ zinc finger 203 289 IPR000197 -
Car07g01118 363 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 9 347 IPR044513 -
Car07g01118 363 SUPERFAMILY POZ domain 19 150 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01118 Car-Chr7 9936943 9940588 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Car07g01118 BTB 3.1e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01118 - - cam:101496955 761.525