Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01108 ATGATTTACACATTTTTTATGATGGTTACAGATAAGATCCACAGCAAAATGGGTGAAGGAACTTTTGGGCAGGTATTAGAATGCTGGGACAGAGAAAGGAAGGAAATGGTAGCCATAAAAATAGTCCGTGGAATAAAGAAGTATCGAGAAGCAGCCATGATAGAAATTGAGATGTTGCAGCAGCTTGGTAAACATGATATTGGAGGCAACCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGACAACTATTGGAATGTATAGCATTTATGCATGATTTGCGCATGATCCATACTGACCTTAAGCCTGAAAACATACTCCTCGTTTCATCAGATTATGTCAAAGTTCCTGACTACAAGATTACATCTAGGTCACCAAACTCATATTTCAAGAAAGTGCCAAAGTCATGTGCTATCAAAGTTATCGATTTTGGTAGCACTACATATGAGCGAGTAGATCAGAGTTACATTGTATCAACTCGTCATTATAGAGCACCAGAAGTTATCCTTGGTCTTGGCTGGAGTCATCCGTGTGATATATGGAGTGTGGGATGTATATTGGTTGAGTTATGCACGGGCGAAGCTTTGTTTCAGACTCATGAAAATTTAGAGCACCTTGCCATGATGGAGAGGGTGCTTGGTCCACTACCATTGCACATGTTGAAGAGAGTTGACCGACATGCTGAGAAGTATGTTAGAAGAAGTAAATTAGACTGGCCAGAGGGTGCAGCCTCAAGGGAGAGCATTAAAGCTGTATTGAAGCTCCCTAGACTACAGAACCTCATAATGCAGCATGTTGACCATTCAGCCGGTGATCTCATACATCTGTTGCAGGGGTTACTTAGATACGATCCCTCTGAAAGACTTTCAGCTAAGGAAGCCCTGAGACATTCCTTTTTCATGAGGAGATCACACTAG 1026 0.4123 MIYTFFMMVTDKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEMLQQLGKHDIGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLRMIHTDLKPENILLVSSDYVKVPDYKITSRSPNSYFKKVPKSCAIKVIDFGSTTYERVDQSYIVSTRHYRAPEVILGLGWSHPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPLHMLKRVDRHAEKYVRRSKLDWPEGAASRESIKAVLKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSERLSAKEALRHSFFMRRSH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01108 341 PANTHER KINASE AFC1 11 339 - -
Car07g01108 341 Gene3D Transferase(Phosphotransferase) domain 1 65 336 - -
Car07g01108 341 CDD PKc_CLK 12 336 - -
Car07g01108 341 ProSiteProfiles Protein kinase domain profile. 11 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01108 341 SUPERFAMILY Protein kinase-like (PK-like) 13 337 IPR011009 -
Car07g01108 341 Gene3D Phosphorylase Kinase; domain 1 12 91 - -
Car07g01108 341 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 11 339 - -
Car07g01108 341 Pfam Protein kinase domain 14 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01108 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Car07g01108 341 SMART serkin_6 11 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01108 Car-Chr7 9845482 9849382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01108 16 336 Core Cell Cycle Gene Families AT1G76540 26.205 4.29e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Car07g01108 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01108 K08287 - gmx:100804452 630.557