Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01075 ATGCCTGTAAATCCATGGATCCTTTTTTTCTTATCCATTTTCCTTTTATTTCCATACCATTCTTTTCTAACTTTTGCAGTAAACCCACAAGGGGAATCTCTTCTTTCATGGAAGAGAACCTTGAATGGATCCTTGGAGATGTTAAGTAACTGGGACCCAATTGAAGACACACCATGTAGCTGGTTTGGAGTGAGTTGCAACATGAAGAATGAAATAGTACAATTGGATCTAAGGTATGTGGATTTGCTTGGAAAACTTCCAACAAATTTCACCTCATTGCTCTCCTTGACAAGTCTCATCTTAACCGGAACAAACATCACCGGTTCGATCCCCATAGAAATAGGCAATCTTGTTGAACTTGTTTACTTGGACTTGAGTGACAATGCATTGAGTGGTGAAATCCCAAGTGAACTCTGCTTCTTGCCGAAACTCGAGGAACTTCATCTTAACTCCAACGAGCTCGTTGGACCGATACCGATCGCAATTGGGAACCTCACAAAGTTAATAAACAACATGAAGAATCTTCAAGTGATAAGAGCTGGAGGAAACAAGAATCTAGAAGGCCCTTTACCACAGGAAATTGGAAACTGTTCCAATTTAGTCATGTTGGGTTTAGCAGAAACAAGCATCTCAGGTTTCATGCCACCGACACTTGGACTATTAAAGAAGCTTGAAACATTAGCCATATACACTTCTCTTCTCTCTGGTCAAATTCCACCTGAACTAGGCGAATGCACACAGCTTCAAAACATTTACCTTTATGAAAACTCACTCACAGGATCCATTCCAAACAAATTGGGAAACCTTAAGAATCTAAAAAACCTGCTATTGTGGCAGAACAGTTTAGTTGGTACTATTCCCCAAGAGATTGGGAATTGTTACCAGTTAACAGTGATCGACGCGTCGATGAATTCAATAACAGGAAGCATTCCCAAAAGCTTTGGGAATTTAACTTATCTGCAAGAACTTCAATTGAGTGTGAACCAAATTTCTGGCGAGATTCCTGCAGAATTAGGGAACTGTCAACAACTGACTCACGTGGAGCTTGATAACAACCTAATAACAGGAACTATACCTTCCGAATTAGGAAACCTTGGGAATTTAACGTTGTTGTTCTTATGGCATAACAAGTTACAAGGTAATATACCTTCTTCTCTTTCCAATTGTGAAAACCTTGAAGCTATTGATCTGTCACAGAATGCGTTAACGGGTCCCATACCAAAAGGGATTTTCCAGCTTAAGAATCTTAACAAGCTTTTGCTTCTTTCTAATAATCTCTCTGGTAAAATTCCATCTCAGATTGGGAATTGTTCATCTCTTATTCGATTCAGAGCTAATGATAATAACATTACTGGTACTATTCCTTCTCAGATTGGGAATCTCAACAATTTGAATTTCCTTGACCTAGGGAATAACATGATTTCTGGTGTTATCCCTGAGGAGATCTCCGGTTGCCGGAATCTCACTTTCTTGGACTTCCATTCTAATTCTATCGCCGGAAGCTTGCCGGAAAGTTTGAGTCAGCTTGTTTCTCTTCAATTTCTTGATTTTTCTGATAACATGATCGAAGGTGCATTGAGTGCTTCTCTCGGCTCGCTTGCCGCTCTAACTAAACTGGTTCTTCGGAAGAATCGAATCTCCGGTTCAATTCCGAGTAAGCTCGGTTTATGTGAGAAGTTGCAGTTACTTGACTTAAGCAGTAATCGACTCTCCGGTGAAATCCCCGGCAGCATCGGAAACATTCCGGCGCTGGAAATAGCTTTGAATCTGAGCACAAACCAACTCTCCGGCGACATTCCACGTGAGTTTTCGGATTTGACTAAACTCGGAGTTCTTGATCTATCTCACAACGTTCTAACTGGAAACCTAAATTATCTCGCCGGCTTAGAAAATCTCGTGGTCCTCAATATCTCCTACAACAAATTCTCCGGGCGCGTCCCAGACACGCAATTCTTCGCGAAGCTTCCACTAAACGTTCTCGCAGGGAATCCATCGCTCTGCTTCTCCGGCAACCAATGCGCTGGAGAAAGTAGCGAGAAATCTAAACGGCGGGCGAAGGAAGCGCGCGTGGTCATGATTGTTCTCCTGTGCGCCGCGTGCGTTTTACTCATGGCGGCGCTGTACGTTGTCGTCGCAGCAAAGCGACGCGGGGACCATGAAAACGACGTCGAGCATAATGGAAAAGATAGTGACGTGGACATGGTCCCACCTTGGGAAGTGACACTGTACCAGAAGCTCGATTTATCAATCTCTGACGTGGCAAAATGTATCTCTGCTGGTAATATTATCGGGCACGGTCGATCCGGCGTCGTTTATAAGGTGAACATGCCAGCAACGGGATTAACCATCGCAGTTAAAAAGTTTAGATCATCGGAGAAATTCTCAGCTTCCTCTTTTTCGTCTGAGATTGCCACGCTGGCACGAATTCGTCACCGTAACATCGTGCGGTTATTGGGTTGGGGTGCGAACCGGAGGACAAAATTACTGTTTTATGATTATTTACCGAATGGTAATTTGGACACGATGTTACATGAGGGGTGTACAGGATTAGCAGTTGAATGGGAGTCGCGGCTTAAGATAGCACTAGGTGTGGCTGAGGGGTTGGCTTATTTACACCACGATTGCGTTCCTGCTATCTTGCACCGGGATGTTAAGGCGCAGAATATTTTGTTAGGAGATAGATATGAAGCATGTTTGGCTGATTTTGGATTCGCTCGTTTCGTTGAAGAACCTCATGCTTCCTTTTCAATTAATCCTCAGTTTGCGGGTTCTTACGGCTACATTGCTCCCGAATATGCTTGCATGATTAAAATAACTGAGAAGAGTGATGTATACAGCTTTGGTGTGGTCCTACTAGAGATAATAACAGGGAAAAGACCTGTTGATCCATTATTCCCAGATGGACATGTTATTCAATGGGTTAGGGAGCATTTAAAGAGCAAGAAGGACCCAATTGAGGTTCTTGATTCCAAGCTTCAAGGTCATCCAGACACACAAATACAAGAGATGTTACAAGCACTTGGTATCTCTTTATTGTGTACTAGTAATCGCGCCGAGGATCGTCCCACCATGAAAGACGTTGCAGCATTATTGAGAGAAATTCGACACGACACTACATCCGGTGCTGAGCCCCTCAAGCCCAAAAGATCTGAAGCTTCGTCCTTTTCGTCGTCTTCTGTGACCCCGGCTCAGTTGTTGCTCCTCCAGTCAAATTCATCACATTCCTCATCCATTGCTTATTCCTCTTCCTCAGCTGCAGCAGCATACCACTCACCAAGGAACCAATCATGA 3291 0.4339 MPVNPWILFFLSIFLLFPYHSFLTFAVNPQGESLLSWKRTLNGSLEMLSNWDPIEDTPCSWFGVSCNMKNEIVQLDLRYVDLLGKLPTNFTSLLSLTSLILTGTNITGSIPIEIGNLVELVYLDLSDNALSGEIPSELCFLPKLEELHLNSNELVGPIPIAIGNLTKLINNMKNLQVIRAGGNKNLEGPLPQEIGNCSNLVMLGLAETSISGFMPPTLGLLKKLETLAIYTSLLSGQIPPELGECTQLQNIYLYENSLTGSIPNKLGNLKNLKNLLLWQNSLVGTIPQEIGNCYQLTVIDASMNSITGSIPKSFGNLTYLQELQLSVNQISGEIPAELGNCQQLTHVELDNNLITGTIPSELGNLGNLTLLFLWHNKLQGNIPSSLSNCENLEAIDLSQNALTGPIPKGIFQLKNLNKLLLLSNNLSGKIPSQIGNCSSLIRFRANDNNITGTIPSQIGNLNNLNFLDLGNNMISGVIPEEISGCRNLTFLDFHSNSIAGSLPESLSQLVSLQFLDFSDNMIEGALSASLGSLAALTKLVLRKNRISGSIPSKLGLCEKLQLLDLSSNRLSGEIPGSIGNIPALEIALNLSTNQLSGDIPREFSDLTKLGVLDLSHNVLTGNLNYLAGLENLVVLNISYNKFSGRVPDTQFFAKLPLNVLAGNPSLCFSGNQCAGESSEKSKRRAKEARVVMIVLLCAACVLLMAALYVVVAAKRRGDHENDVEHNGKDSDVDMVPPWEVTLYQKLDLSISDVAKCISAGNIIGHGRSGVVYKVNMPATGLTIAVKKFRSSEKFSASSFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLPNGNLDTMLHEGCTGLAVEWESRLKIALGVAEGLAYLHHDCVPAILHRDVKAQNILLGDRYEACLADFGFARFVEEPHASFSINPQFAGSYGYIAPEYACMIKITEKSDVYSFGVVLLEIITGKRPVDPLFPDGHVIQWVREHLKSKKDPIEVLDSKLQGHPDTQIQEMLQALGISLLCTSNRAEDRPTMKDVAALLREIRHDTTSGAEPLKPKRSEASSFSSSSVTPAQLLLLQSNSSHSSSIAYSSSSAAAAYHSPRNQS 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01075 1096 MobiDBLite consensus disorder prediction 1038 1057 - -
Car07g01075 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 879 891 IPR008271 GO:0004672|GO:0006468
Car07g01075 1096 SUPERFAMILY L domain-like 29 229 - -
Car07g01075 1096 SMART serkin_6 757 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01075 1096 Gene3D Ribonuclease Inhibitor 169 306 IPR032675 -
Car07g01075 1096 Gene3D Transferase(Phosphotransferase) domain 1 834 1052 - -
Car07g01075 1096 PANTHER OS01G0170300 PROTEIN 8 1052 - -
Car07g01075 1096 Gene3D Phosphorylase Kinase; domain 1 735 833 - -
Car07g01075 1096 PRINTS Leucine-rich repeat signature 560 573 - -
Car07g01075 1096 PRINTS Leucine-rich repeat signature 606 619 - -
Car07g01075 1096 SUPERFAMILY L domain-like 172 431 - -
Car07g01075 1096 Pfam Leucine rich repeat 343 402 IPR001611 GO:0005515
Car07g01075 1096 Pfam Leucine rich repeat 559 619 IPR001611 GO:0005515
Car07g01075 1096 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Car07g01075 1096 Pfam Leucine rich repeat 446 498 IPR001611 GO:0005515
Car07g01075 1096 Gene3D Ribonuclease Inhibitor 26 168 IPR032675 -
Car07g01075 1096 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Car07g01075 1096 ProSitePatterns Protein kinases ATP-binding region signature. 763 787 IPR017441 GO:0005524
Car07g01075 1096 SMART LRR_typ_2 117 139 IPR003591 -
Car07g01075 1096 SMART LRR_typ_2 461 485 IPR003591 -
Car07g01075 1096 SMART LRR_typ_2 141 165 IPR003591 -
Car07g01075 1096 SMART LRR_typ_2 533 557 IPR003591 -
Car07g01075 1096 SMART LRR_typ_2 365 389 IPR003591 -
Car07g01075 1096 SMART LRR_typ_2 629 653 IPR003591 -
Car07g01075 1096 SMART LRR_typ_2 413 437 IPR003591 -
Car07g01075 1096 SMART LRR_typ_2 317 341 IPR003591 -
Car07g01075 1096 SMART LRR_typ_2 269 293 IPR003591 -
Car07g01075 1096 SMART LRR_typ_2 509 532 IPR003591 -
Car07g01075 1096 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1052 - -
Car07g01075 1096 Gene3D Ribonuclease Inhibitor 307 408 IPR032675 -
Car07g01075 1096 SMART LRR_sd22_2 606 631 - -
Car07g01075 1096 SMART LRR_sd22_2 461 484 - -
Car07g01075 1096 SMART LRR_sd22_2 365 394 - -
Car07g01075 1096 SMART LRR_sd22_2 485 508 - -
Car07g01075 1096 SMART LRR_sd22_2 509 535 - -
Car07g01075 1096 SMART LRR_sd22_2 117 149 - -
Car07g01075 1096 SMART LRR_sd22_2 557 583 - -
Car07g01075 1096 MobiDBLite consensus disorder prediction 1076 1096 - -
Car07g01075 1096 ProSiteProfiles Protein kinase domain profile. 757 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01075 1096 Gene3D Ribonuclease Inhibitor 409 683 IPR032675 -
Car07g01075 1096 SUPERFAMILY L domain-like 382 667 - -
Car07g01075 1096 SUPERFAMILY Protein kinase-like (PK-like) 742 1031 IPR011009 -
Car07g01075 1096 Pfam Protein kinase domain 760 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01075 Car-Chr7 9534765 9539520 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01075 25 1085 Receptor kinase-like Gene Family AT5G56040 52.806 0.0 1079
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car07g01075 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01075 - - gmx:100778064 1690.24