Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01067 ATGCAAAATTACCACATTTTACGGGGAATTATATTATCATGTTTATTATTATGCGTGGCTTGCTTCAACGGTGCGGTACACGAAGCAGGTTTAACGTGTGGGTCTTATCAATACCCTGGTGATAATGGCGGCAACAAGTTGATGCAAAATTGGATGATTGCAATGGACGGTGTGTCGTTTCAGGTGAAAGAACACGGTTGGGGAGCACAAACATTAGTTGGAAATTGGCATCCAATGTACGCATTAGGACAATGCCACCGCGATCTGAATCCCACACAATGCTACGATTGTTTCACACAAGCGAGACAATTATTATCGCGGTGTGTCCCAAAGGTTGCGGGGAGAATTTACCTTGACGGTTGCTTCCTTCGTTATGACAACTATACATTCTTTGATGAGAGTGTGGACTCCAATCGCGATACAAACATGTGTGGGACGACAGAAAAGGGAGAAACGACTCTCAAACGAGTTGCATCGTTGATCTCGAACGTGAGCAAGAGTGCAGGGGAACATAGGTTTGCGGTGGAAGGAGAGGGTGGTGTGTATGCGTTGGCACAATGTTGGGAGACGGTGGATAAATGGAGTTGCCAGAGATGTTTGAGAGAAGCAGGGAAAAAAGTGCAGGGATGTGTGCCTGCTCCTGAGGGTAGAAGCTTGTTTACTGGTTGTTTTATGAGGTATTCAACCCGTAAATTCTACAAGGACGTGGTTGCACAAAATGACGCACAAACTACTCCTCCTCCTCCTCGAGACAGGCACATTAATGTTTGGATAATCATTGCATGTGTCATATCGGCAATTGCAGTCATCTTACTTATTGTCCCTATTGCATTTCTAAGCAGGAGGAAAATGGTATCACATGAAAAAAGCAACAACCATTTTGGCGGGTCGCCTAGCTTTGCCTATGTAGCTGGTTTCAGTTTTAGGTACGATGTGCTTGAGAAGGCCACAAATTATTTTGATGTGACAAATAAATTAGCACCAAAGGGAGAAGAAGATGGTTCTATGTTCAAAGCAACACTCCCCACAGGAAGAACTGTTGCTGTTAAACGTTTATCTTTTGATACACGACAATGGACAGATGTTTTATTCAATGAAGTAAATTTGATTAATGGGATTCAACATAAGAATGTGGTGAAACTTTTGGGGTGCAGCATTGATGGTCCTGAAAGCTTGTTGGTTTATGAATTTCTGCCTAATAAAAGTCTTGATCAAATCCTTTTTGATAAGGACTCAAAAAATGTTGTGAGTTGGGAGCAACGGTTTCAAATCATATGTGGGATAGCTGAAGGCTTAGCATACCTTCATGAAGGCTCTGGAACAAAGATTATTCACAGAGACATAAAGTCCAGTAACATTCTTCTTGATGAGGCTCTTAATCCAAAAATTGTTGATTTTGGTCTTGCTCTTTGTGTTGCTAAAAATAAATCTAATCTTAACACTGGAACTGCAGGGACACTGAGATATATGGCTCCTGAGTGTCTCAGTCAAGGACAAATGACAGAGAAGTCAGATATATATGCTTTTGGTGTGATGGTTACTGAAATTGTTTGTGGTAAAAAGAATAGTGCTTACCCTCAAGGGTCAAATTCAGTACTCCACTCTGTGTGGAAGAGTTTCAAGGAAAATAATATCACAACATCTGTCGATCCCAGTCTGCAAGGAAAATGTGTGGTCGAAGAGGCATCAAGTGCACTTCAAATTGGTCTTCTTTGTACACAATCTTCTGCTACTCTTAGACCATCCATGTCAGAAGTAGTTCAAATGCTAACAAAAAAAGACTACATTATTCCATCACCAAAGCAACAACCATTCCTTAATTACACAGTGCTTACTTTAGATGACCGCACTTTAGCTTCCACCATGAGCATTACGTCAAATGGGCATGCAAGTACAAGATCATCTTTCCATAGCACCACTAGTTCTTTACACCCAGGTGAAGATGCAACACTACTAGAGAGTCGTTTTTCTACTTCTGGCAGGTTCACTAATTCAGAGAGCCCTGATTTAAGTATCCAAGTAAATATGCTGGTACCTCAACCAAGGCTTGTTGTAACTTGTAGGCGAAGGACCGTACGTAGCTGTGAGAAAGCAGAGAGAACAAATGGAAAGTTGAACTCAAAGCGTTCTTACTTGCTACCTTCACTCATTTCTTCATCCGTTATTCTTCACTCACCGGTACGTCTTTCTTCTGAACTCAATCTTCACATGATTTTGGTATTCCACAAAAATTGCTTTTGTATAGGGATGGAGGCTATAGAAGTTGTGGTCTTATCTAGCGACGATGAAGGGGGAAAGGTTGGCCTTGAAGCCGCTAGTAGTGGAAACCAACATGAGACCAACAAAGGCTTACCAACTATGCATCAGAGATCTCAAAGTCATTCTAGTAGTCAAGTTTCTGAAGAAAATTTAATATCTAATGGTCCAAGTTCATGTCATAGCTATACAGGTGCATCAGAGCTAGGCTTTTTGTCAGTTGATGACACTGGCCTTTCTTGTTCACAACCAATTAATGCAGCACCCCTCTGTAGGAAGTTTTGGAAAGCTGGAAACTATGACAATTGGCTTGGTTCGAAAGTCAGCTCCCAATATGCAAAAGATTATCTTCATGTCCATCCCCTGTTCCTTCACTCAAATGCAACTTCGCATAAGTGGGTATTTGGTGCCGTAGCTGAGTTTCTTGATAATGCAGTTGATGAGATCCAAAATGGGGCTACTTTTGTTATGGTGGATAAAATTTTAAATCCGAAGGATGGAAGTCCAGCATTGTTGATTCAAGACAATGGTAATGGAATGgatccagaagcaatgcgatgttgcatgagttttggattttcagataAGAAGTCAAAATATGCAATTGGACAGTATGGAAATGGTTTCAAGACTGGTAGTATGAGACTGGGTGCAGATGCGATTGTCTTCAGCTGCCACATGAATGATATGGTATACACTAAAAGCATTGGACTTCTGTCTTATACATACTTGATGCGAGCAAAGCTTGACAGAATTGTAGTGCCCATGGTAAGTTATAAGCTTAATACAGCAACGGGATACTTCGAAAAACTAAATCACCAAGAGCATTTTGAGTCTAATCTGTCCTTGCTGCTGCACTGGTCACCATTTATATCAGAAGCAGAACTCATGAAACAATTTGATGACATTGAATATCATGGCACTAAAATTATTATCTTCAATTTATGGTTCAATGATGATGGGAATTTGGAACTAGACTTTGATACCGATCCTGAGGATATCCGTATTGCTGGAGATATCCAGAAGATTGGAACAATTTCAGCCTGGAAGACAGTAAATGAGCAACATATTGCTAACCGGATTCATTATTCTTTACGAGATTACTTGTCCATACTGTACTTGCGGGTGCCAGAAAATTTTAGAATTATATTGCGAGGGCAAGTTGTGAAGCTTCGTAACATTGCAGATGATCTTAAAGATATTCAGTATATCTTGTATAGACCACAAACTGGTGGTTCAGGAGAGGCAATAGTTGTGACAACAATTGGATTTCTTAAGGAAGCTCCTGAAGTCAGCATCCACGGCTTCAATGTATATCACAAAAATCGGCTGATACTGCCATTTTGGCCAGTTGTGAGCTATGCAAACAATATGGGTAGAGGAGTTGTTGGAATATTGCAAGCCGATCATCTTCAGCCAACTCATAATAAGCAAGACTTTGAGAGAACTTCCCTGTTTCAAAAGCTGGAATTGCGCTTGAAGGAAATGACACAGGAATACTGGGGTTGTCATTGTTATGAAATTGGGTATCAGGGAAAGAAGCATAGAGGTCCAGTTGGCCAACTTAGTTCATCAATGGAGAAACCAGTTGTTACAGAAAACCTAGTTGCATTGGACAACTGTTCATCACCTGTACAGATATCTAATGCACTAGGCAAATTCGAGCAAAGTAAATTGCCATTTCGTATAAAGAGGAAGACACATGGAATAGATCATCACGAGATGAAAAGGCAAGCAGTGGAAAAGAATTTAACAGATCTTCGTTGCAATCGGAATGTACAGAACGCCGCATCTCCTGCAGACCACATGATAGACCAAGAAATTGTAAACTTAATGGAAAGGAACAAGAAACTCATTGCTGAATGTTTTGCAATAGAAAAGGCGGAGAAGGAACTTAATCATAAGGTGACACAGCTTAGAAGTATAATTGAAGTAGCTAAGCTAGAGTACAATAGACTTTTGGCAGAAGCACTAGACTTAAACGTGATTTAG 4248 0.4011 MQNYHILRGIILSCLLLCVACFNGAVHEAGLTCGSYQYPGDNGGNKLMQNWMIAMDGVSFQVKEHGWGAQTLVGNWHPMYALGQCHRDLNPTQCYDCFTQARQLLSRCVPKVAGRIYLDGCFLRYDNYTFFDESVDSNRDTNMCGTTEKGETTLKRVASLISNVSKSAGEHRFAVEGEGGVYALAQCWETVDKWSCQRCLREAGKKVQGCVPAPEGRSLFTGCFMRYSTRKFYKDVVAQNDAQTTPPPPRDRHINVWIIIACVISAIAVILLIVPIAFLSRRKMVSHEKSNNHFGGSPSFAYVAGFSFRYDVLEKATNYFDVTNKLAPKGEEDGSMFKATLPTGRTVAVKRLSFDTRQWTDVLFNEVNLINGIQHKNVVKLLGCSIDGPESLLVYEFLPNKSLDQILFDKDSKNVVSWEQRFQIICGIAEGLAYLHEGSGTKIIHRDIKSSNILLDEALNPKIVDFGLALCVAKNKSNLNTGTAGTLRYMAPECLSQGQMTEKSDIYAFGVMVTEIVCGKKNSAYPQGSNSVLHSVWKSFKENNITTSVDPSLQGKCVVEEASSALQIGLLCTQSSATLRPSMSEVVQMLTKKDYIIPSPKQQPFLNYTVLTLDDRTLASTMSITSNGHASTRSSFHSTTSSLHPGEDATLLESRFSTSGRFTNSESPDLSIQVNMLVPQPRLVVTCRRRTVRSCEKAERTNGKLNSKRSYLLPSLISSSVILHSPVRLSSELNLHMILVFHKNCFCIGMEAIEVVVLSSDDEGGKVGLEAASSGNQHETNKGLPTMHQRSQSHSSSQVSEENLISNGPSSCHSYTGASELGFLSVDDTGLSCSQPINAAPLCRKFWKAGNYDNWLGSKVSSQYAKDYLHVHPLFLHSNATSHKWVFGAVAEFLDNAVDEIQNGATFVMVDKILNPKDGSPALLIQDNGNGMDPEAMRCCMSFGFSDKKSKYAIGQYGNGFKTGSMRLGADAIVFSCHMNDMVYTKSIGLLSYTYLMRAKLDRIVVPMVSYKLNTATGYFEKLNHQEHFESNLSLLLHWSPFISEAELMKQFDDIEYHGTKIIIFNLWFNDDGNLELDFDTDPEDIRIAGDIQKIGTISAWKTVNEQHIANRIHYSLRDYLSILYLRVPENFRIILRGQVVKLRNIADDLKDIQYILYRPQTGGSGEAIVVTTIGFLKEAPEVSIHGFNVYHKNRLILPFWPVVSYANNMGRGVVGILQADHLQPTHNKQDFERTSLFQKLELRLKEMTQEYWGCHCYEIGYQGKKHRGPVGQLSSSMEKPVVTENLVALDNCSSPVQISNALGKFEQSKLPFRIKRKTHGIDHHEMKRQAVEKNLTDLRCNRNVQNAASPADHMIDQEIVNLMERNKKLIAECFAIEKAEKELNHKVTQLRSIIEVAKLEYNRLLAEALDLNVI 1415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01067 1415 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 887 983 - -
Car07g01067 1415 SMART serkin_6 320 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01067 1415 ProSiteProfiles Protein kinase domain profile. 289 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01067 1415 Gene3D Transferase(Phosphotransferase) domain 1 398 599 - -
Car07g01067 1415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Car07g01067 1415 Gene3D - 862 998 IPR036890 -
Car07g01067 1415 Gene3D - 138 232 IPR038408 -
Car07g01067 1415 Gene3D - 41 130 IPR038408 -
Car07g01067 1415 MobiDBLite consensus disorder prediction 768 807 - -
Car07g01067 1415 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 681 - -
Car07g01067 1415 SUPERFAMILY Protein kinase-like (PK-like) 304 594 IPR011009 -
Car07g01067 1415 ProSiteProfiles Gnk2-homologous domain profile. 131 232 IPR002902 -
Car07g01067 1415 Pfam Salt stress response/antifungal 151 229 IPR002902 -
Car07g01067 1415 Pfam Salt stress response/antifungal 75 128 IPR002902 -
Car07g01067 1415 MobiDBLite consensus disorder prediction 773 807 - -
Car07g01067 1415 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 681 - -
Car07g01067 1415 Coils Coil 1322 1342 - -
Car07g01067 1415 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 885 1088 IPR036890 -
Car07g01067 1415 Pfam Morc6 ribosomal protein S5 domain 2-like 1115 1253 IPR041006 -
Car07g01067 1415 Pfam Protein kinase domain 334 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01067 1415 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Car07g01067 1415 Gene3D Phosphorylase Kinase; domain 1 302 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01067 Car-Chr7 9450186 9464615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01067 50 637 Receptor kinase-like Gene Family AT1G70520 39.216 4.60e-131 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g01067 Pkinase 8.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01067 - - mtr:MTR_4g105530 951.429