Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01060 ATGGTTCTTGACACAAATCTCAGAGAAAACTATGCTTCACAACCAATTCATTTGCAAGAAAACTACTTATTAAAACCAAGGATGAAAGATGAGCAGCTTCCTTTTGTTGCTCCTAATTCATCTCAATGTTTCTTGCAAGATTTTAACCATATTGATCAGTTTCATCCTGTGCATGGCTCATCATCATCCAATCAAGTTTTTGGTGTTCAAACTCAAAATTTTGACCCTTTTGATAATGCAGCATGTGCACAAACAGATTTTGAAGTTTATGATGGCAACAACAAATCATTTGCTGAGAATAATGGAAGTGGTCATGCTCACCTTATTGATAATTTCCAATATGATGGTTATAGTTTGAATATCCCTAGAAGGAATATTCAAGTTGATATGATGGTTGAAAATCATAGTTATTTTCCATTTAATAATCCTTCAGAAACAAAGCCATTGAATTATGTTGTACCAGATGATGAAGTCTCTAGCATAGCTCCAACAAATTATTACCAAAGAGCTGGATTGAATAGAAACAACAGGTTATCTCCTACCACAAGAAGAGCATTTAAAGCAAGGAAGAAGTCCAACATAGTGAAGGGACAATGGACAGTGGATGAAGATAGATTGTTGATTCAACTTGTGGAACAATATGGAATGAGGAAGTGGTCTCATATTGCTCAAAAGTTGCCTGGAAGAATTGGGAAACAATGCAGAGAAAGATGGCACAACCATTTAAGGCCTGACATTAAGAAGGACATATGGACTGATGAAGAGGATAAAATATTGATCCAAGCTCATACAGAGATAGGGAATAAATGGGCAGAGATTGCAAAGAGATTGCCAGGAAGAACTGAAAACTCAATAAAAAACCATTGGAATGCAACAAAGAGAAGGCAATATTCCAAAAGAAAATGTAGATCAAAGTATCCTAGAAGCACTCTTCTGCAGGAATATATCAAAAGCTTGAACTTAGACCAAAATCCACCAAGAGACTTTAGAAAAAGATCTTCTGTCAATGCCAAGAAAATTACAAATACTTTcacaagcacaagcacaagcacaagcaaagcaGCACAGGTTCCTCCTCAGCTACACATTACAAATCAATTTTGTCCTAACGACCGATCGGTGCCAAACTATGAGTTAAATGATTTTTGTTTGGATGATAATTTGTTTGAAGAAGGGTGTGGTATTGATTCTTTGCTAGATGATATGTCGAGTGTTCCTACTTTGGATGGTGAGAAAGGTTTTGATGAAAAACAATGTGATAATAAGGGAAGCATGCAAGTTGTTAATGTTGTTGAGCATCAATTTGAGACAGGGATTGAAGTTAAGAAGGAGTTGGATTTGGTGGAGATGATCTCTCAGGTTAATCAAAGTATTAATTAA 1380 0.3478 MVLDTNLRENYASQPIHLQENYLLKPRMKDEQLPFVAPNSSQCFLQDFNHIDQFHPVHGSSSSNQVFGVQTQNFDPFDNAACAQTDFEVYDGNNKSFAENNGSGHAHLIDNFQYDGYSLNIPRRNIQVDMMVENHSYFPFNNPSETKPLNYVVPDDEVSSIAPTNYYQRAGLNRNNRLSPTTRRAFKARKKSNIVKGQWTVDEDRLLIQLVEQYGMRKWSHIAQKLPGRIGKQCRERWHNHLRPDIKKDIWTDEEDKILIQAHTEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRSTLLQEYIKSLNLDQNPPRDFRKRSSVNAKKITNTFTSTSTSTSKAAQVPPQLHITNQFCPNDRSVPNYELNDFCLDDNLFEEGCGIDSLLDDMSSVPTLDGEKGFDEKQCDNKGSMQVVNVVEHQFETGIEVKKELDLVEMISQVNQSIN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01060 459 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 191 246 IPR017930 -
Car07g01060 459 PANTHER BNAC07G50190D PROTEIN 106 322 - -
Car07g01060 459 Pfam Myb-like DNA-binding domain 251 290 IPR001005 -
Car07g01060 459 Pfam Myb-like DNA-binding domain 196 242 IPR001005 -
Car07g01060 459 Gene3D - 249 314 - -
Car07g01060 459 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 247 297 IPR017930 -
Car07g01060 459 PANTHER MYB PROTEIN-RELATED 106 322 - -
Car07g01060 459 CDD SANT 199 242 IPR001005 -
Car07g01060 459 Gene3D - 195 248 - -
Car07g01060 459 ProSiteProfiles Myb-like domain profile. 191 242 IPR001005 -
Car07g01060 459 SMART sant 195 244 IPR001005 -
Car07g01060 459 SMART sant 247 295 IPR001005 -
Car07g01060 459 CDD SANT 251 293 IPR001005 -
Car07g01060 459 ProSiteProfiles Myb-like domain profile. 243 293 IPR001005 -
Car07g01060 459 SUPERFAMILY Homeodomain-like 193 289 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01060 Car-Chr7 9407323 9409062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01060 28 410 MYB Transcription Factor Family AT4G18770 44.028 1.43e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car07g01060 Myb_DNA-binding 4.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01060 K09422 - gmx:100816653 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01728 05 62277580 62279315 Car07g01060 07 9407323 9409062 PCT