Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01037 ATGAAGTACTCATCTCCTCAACCACCTTTTTCTGCGCTTCAAACGCCAAAGAATGTCAATATTAGTAATGAGAAGGAAACAGCAACATCTTCATTTATAAGCAGAATCAGTCCACTTATTTTGTTGGTCCTAATAATACTAACAGTTATCTTCTTTATCTATGGACTTATCCAATTAGTTCTATGGTTTTTAATGAAAATTGCATCCTCTTCAACATCCCTTTATAATTCCAACAGATTCCAAGAATCGACCCGAACCCGCGCTTTTCATAGGCAACTACAACAGCTTTTCCACTTGCATGATTCAGGTCTAGACCAAGCTCTCATAGACACTCTCCCACTTTTCAACTACAAAGCTTTAATGGGTTTGAAGGAACCTTTTGATTGTGCTGTGTGTCTCTGTGAGTTTTCTGATCAAGACCAACTGAGGTTGGTTCCTATGTGCAGCCATGCCTTTCACATGAACTGTCTTGACACATGGCTTCTCTCAAATTCTACTTGTCCTCTTTGTCGAGCAAATGTCTCTAGCTCTAGTAGTTTTCTTATGCAGAATGTTGAAAATTCGAAAGAGAATATTGTTGAGTGTTCAGAATATAGTGAAAGAGAAATAACTGCAGAGGAACAAAGGGTGTTTTCTGTGAGACTTGGAAAATTCAGAAATAATGGAATAGTAGAGGATGGTAGTTGTAGTTTGGATGAGAGGAGATGTTATTCAATGGGATCATATCAGTATGAGCTTTGTAATTCGAATTTGCAAGTGGTTTTGTTGTCTCAATCTTCTTGTTGTGATGATAAGTTAGGAAGTGAAGAAAATGGCAATGTGGAAGGGAAGAGGGTAGGGACCACAATTAAAGGTGAGAGCTTCTCTGTTTCTAAGATATGGCTTTGGTCCAAGAAGAGCAAATTTCCTAGTTCGGGTGTTGATTTCCCTTGA 933 0.3837 MKYSSPQPPFSALQTPKNVNISNEKETATSSFISRISPLILLVLIILTVIFFIYGLIQLVLWFLMKIASSSTSLYNSNRFQESTRTRAFHRQLQQLFHLHDSGLDQALIDTLPLFNYKALMGLKEPFDCAVCLCEFSDQDQLRLVPMCSHAFHMNCLDTWLLSNSTCPLCRANVSSSSSFLMQNVENSKENIVECSEYSEREITAEEQRVFSVRLGKFRNNGIVEDGSCSLDERRCYSMGSYQYELCNSNLQVVLLSQSSCCDDKLGSEENGNVEGKRVGTTIKGESFSVSKIWLWSKKSKFPSSGVDFP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01037 310 Pfam Ring finger domain 128 171 IPR001841 -
Car07g01037 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 179 IPR013083 -
Car07g01037 310 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 310 - -
Car07g01037 310 CDD RING-H2_PA-TM-RING 128 171 - -
Car07g01037 310 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Car07g01037 310 SMART ring_2 129 170 IPR001841 -
Car07g01037 310 SUPERFAMILY RING/U-box 108 177 - -
Car07g01037 310 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 2 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01037 Car-Chr7 9234628 9236077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01037 27 301 C3H Transcription Factor Family AT2G18650 39.759 4.29e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01037 - - cam:101488909 599.742