Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01009 ATGGATATTCCGATCCCGACTCGACAGTTATTCATTAACGGAGACTGGAAATCTCCCATCCTCAACAAACGGATTCCCATCATCAACCCTTCCACCCAACACATCATCGGTGATATCCCAGCGGCTACTAAGGAAGATGTAGATGCCGCCGTTGCCGCCGCCAAAACTGCTCTCTCTCGCAACAAAGGTGCAGATTGGGCTTCCGCTTCTGGCGCTGTTCGAGCTCGCTATCTACGCGCCATCGCCGCCAAGGTTATCGAGAAAAAGACTGTGCTCGCTAAACTTGAAGCCGTTGATTGTGGAAAACCACTCGATGAAGCCGCGTGGGACATTGATGATGTTGCTGGTTGCTTTGAGTTTTATGCGGATCTTGCTGAAAAATTGGATGCAAAGCAAAAGGCTCCTGTGTCTCTTCCCATGGATACTTTCAAGAGTTATGTCCTTAGGGAGCCTATTGGTGTTGTTGGATTAATAACTCCATGGAATTATCCTCTGTTAATGGCGACGTGGAAAGTTGCTCCTGCTCTTGCTGCTGGCTGTGCTGCAATATTGAAGCCATCTGAATTGGCATCTTTAACCTGCTTGGAGCTGGGTGAAATATGCAAAGAAGTGGACCTTCCTCCAGGTGTATTAAATATTCTCACTGGATTAGGACATGAAGCTGGTGCTCCTTTGGCATCTCATCCTGATGTTGACAAGATTGCCTTTACTGGAAGCTCTGCAACTGGGAGCAAAATTATGACAGCTGCAGCTCAGCTGGTCAAGCCTGTTTCTCTAGAGCTTGGGGGAAAAAGCCCATTAATTGTTTTTGAGGATGTTGACCTCGACAAGGCTGCTGAATGGGCCATCTTTGGCTGCTTCTGGACAAATGGTCAGATATGCAGTGCAACTTCCCGTCTTATTGTACATGAAAGTATAGCTACAGAACTTTTGAATAGGATGGTGAAATGGATCAAAAACATCAAAATTTCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGACCTGTTGTTAGCGAAGGACAGTATGAAAAAATATTGAAGTTTATCTCGAATGCTAAGAGTGAGGGTGCAACCATTTTGACTGGTGGGTCTCGACCAGAGCATCTAAAGAAAGGATTCTTTGTTGAACCAACCATTATCACTGATGTGACTACTTCCATGCAAATTTGGAAAGAAGAAGTATTTGGACCTGTTCTGTGTGTAAAAACATTTAGCACTGAGGAAGAAGCTATTGATCTAGCAAATGACACAATCTATGGCTTAGGGGCTGCTGTAATATCAAATGATCTAGAAAGATGTGAGCGCATTACTAAGGCTTTTAAGGCTGGAATCGTATGGATCAATTGCTCTCAACCATGCTTCACTCAAGCCCCATGGGGAGGCATTAAACGTAGTGGTTTTGGCCGTGAACTGGGAGAATGGGGACTTGACAATTACTTGAGCGTGAAACAAGTGACTCAGTATATCTCTGAGGAACCATGGGGCTGGTACCAACCTCCTGCAAAACTGTGA 1512 0.4524 MDIPIPTRQLFINGDWKSPILNKRIPIINPSTQHIIGDIPAATKEDVDAAVAAAKTALSRNKGADWASASGAVRARYLRAIAAKVIEKKTVLAKLEAVDCGKPLDEAAWDIDDVAGCFEFYADLAEKLDAKQKAPVSLPMDTFKSYVLREPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVDLPPGVLNILTGLGHEAGAPLASHPDVDKIAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLIVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLIVHESIATELLNRMVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFISNAKSEGATILTGGSRPEHLKKGFFVEPTIITDVTTSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDTIYGLGAAVISNDLERCERITKAFKAGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQYISEEPWGWYQPPAKL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01009 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 503 - -
Car07g01009 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Car07g01009 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Car07g01009 503 SUPERFAMILY ALDH-like 4 486 IPR016161 GO:0016491
Car07g01009 503 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 503 - -
Car07g01009 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Car07g01009 503 CDD ALDH_F10_BADH 27 487 - -
Car07g01009 503 Pfam Aldehyde dehydrogenase family 23 485 IPR015590 GO:0016491
Car07g01009 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01009 Car-Chr7 8946723 8951434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01009 1 500 Aldehyde Dehydrogenase Gene Family AT1G74920 82.400 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01009 K00130 - gmx:100170731 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01009 07 8946723 8951434 Car05g01765 05 62773010 62780668 PCT