Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01006 ATGGCTGCCGCCGGCGAAATTTTCCGGTCTAATTTCACGGAATTGTTAGATGAATCACCTTCAAGTGCAGATGAATTGCACGTACTTGCTGTTGATGACAATCTTGTTGATCGAAAGGTTATTGAACGTTTGTTGAAGATTTCATCGTGTAAAGTGACGGTTGTGGAGAGTGGAAGACGAGCTCTTCAATATTTGGGGTTAGATGGAGAGAACAGTGATATTGGATTTGATGGTGTTAAGGTTAATCtgataatgacagattattccatgcctgggatgacaggatatgacttactcaagaaaatcaaggTGGGTAATTATTGGTTGGAGATTCCAGTGGTGATCATGTCGTCGGAGAATGTTTTGACTCGAATTGATAGGTGCTTGGAAGAAGGGGCAGAGGATTTTCTGTTGAAGCCAGTCAAGTTGTCAGATGTAAGACGCTTGAAAGATTTCATCATGAGAGGTGAAGTGAAGAATGGTGAAAAAAGTTCTTTCAAAAGAAGGCGATCAACAGATGATTGTGGTCCTTCTCTATCTCTATCAACTACATTCTCACCAATGTGTCATTCATGCGATCCACCATCATCAGTGTTCTCTCCACTCTCACCATCAACATTATCCTCTAAGAAATCTAGATTGTGA 645 0.3705 MAAAGEIFRSNFTELLDESPSSADELHVLAVDDNLVDRKVIERLLKISSCKVTVVESGRRALQYLGLDGENSDIGFDGVKVNLIMTDYSMPGMTGYDLLKKIKVGNYWLEIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMRGEVKNGEKSSFKRRRSTDDCGPSLSLSTTFSPMCHSCDPPSSVFSPLSPSTLSSKKSRL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01006 214 Pfam Response regulator receiver domain 28 147 IPR001789 GO:0000160
Car07g01006 214 CDD REC_typeA_ARR 28 149 - -
Car07g01006 214 MobiDBLite consensus disorder prediction 194 214 - -
Car07g01006 214 SMART REC_2 26 150 IPR001789 GO:0000160
Car07g01006 214 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 8 214 - -
Car07g01006 214 SUPERFAMILY CheY-like 25 150 IPR011006 -
Car07g01006 214 Gene3D - 26 175 - -
Car07g01006 214 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
Car07g01006 214 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 214 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01006 Car-Chr7 8926225 8928477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01006 5 179 Response Regulator Gene Family AT3G48100 61.798 3.46e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car07g01006 Response_reg 3.4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01006 K14492 - gmx:100796843 280.796