Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00997 ATGGCCTCCAATCTCACAAGCCTCACAATTCCATCTTCTTCATATTCACGTTCCCTCAATGAAACCAATCCATCTACAAGCCCTCAAGTCATATACAGTAGGTCCCACTCCTTTGTGGGTCCCTCCCCTCGTTTCCCTCCTTCCTCCGATAACAATCTCTTCTTTCTCGACGAACTCACCGACGACGACGAAGACCAAGACCGACCCCTCAAATTCGGACCCTCCGATTTCCAAATTCTCAGAGTTGTAGGACAGGGTGCCTTTGGCAAGGTCTTTATGGTCACTAAAAAACATGGAGATGAACGAATCTTCGCTATGAAGGTTATGAAGAAAGACACTATCATTAAGAAAAACCACGTTGATTATATGAAAGCCGAAAGAGATATTCTCACCAAAGTTCTTCATCCTTTCATCGTTCCCCTTCGTTACTCTTTCCAAACTAAATCTAAATTATATTTGATTTTGGACTTTATTAATGGTGGACATCTTTTCTTTCATTTATGTAGACAAGGCATTTTTAGTGAggatgaggcacggatttacactgctgagatagtatctgctgtttcacatcttcacaacaacggcattgtgcatcgcgaccttaaacctgaaaaCATACTCATGGATGCTGATGGCCATGTGATGCTAACTGATTTTGGAATGTCGAAAGAGATTGAGGAATCTGAGAGATCTAATTCTATGTGTGGGACAACTGAATACATGGCTCCGGAAATCCTTATGGGGAAAGGCCATAACAAGGATGCAGATTGGTGGAGTGTTGGTGTTCTCTTGTATGAAATGATAACAGGAAAGGCACCATTTATACATACTAACAGAAAGAAGCTACAGGAGAAAATCATCAAAGAGAAAGTTAAACTTCCGCCATACCTTACCAGTGAAGCTCATTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCGTCAACAAGGTTAGGCAATGGTCCAAATGGAGATGAGCAAATAAAAAATCATAATTGGTTCAGGTCAATCAATTGGAAAAAATTGGAGGCAAGAGAACTGCAACCGAAGTTTAAACCATCCGATGTATCTGGAAAAGACTGCACAACTAATTTTGATCGATGCTGGACAACAATGCCTCTTGAGGATTCTCCGGCATCAACCCCTACAGCAGGTGACCATTTCCAAGGCTATACTTATGTGGCACCAAATCCTTGGCTTTCTTCTAGATAA 1212 0.3812 MASNLTSLTIPSSSYSRSLNETNPSTSPQVIYSRSHSFVGPSPRFPPSSDNNLFFLDELTDDDEDQDRPLKFGPSDFQILRVVGQGAFGKVFMVTKKHGDERIFAMKVMKKDTIIKKNHVDYMKAERDILTKVLHPFIVPLRYSFQTKSKLYLILDFINGGHLFFHLCRQGIFSEDEARIYTAEIVSAVSHLHNNGIVHRDLKPENILMDADGHVMLTDFGMSKEIEESERSNSMCGTTEYMAPEILMGKGHNKDADWWSVGVLLYEMITGKAPFIHTNRKKLQEKIIKEKVKLPPYLTSEAHSLLKGLLQKDPSTRLGNGPNGDEQIKNHNWFRSINWKKLEARELQPKFKPSDVSGKDCTTNFDRCWTTMPLEDSPASTPTAGDHFQGYTYVAPNPWLSSR 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00997 403 Pfam Protein kinase domain 77 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00997 403 Gene3D Phosphorylase Kinase; domain 1 75 378 - -
Car07g00997 403 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 17 402 - -
Car07g00997 403 ProSitePatterns Protein kinases ATP-binding region signature. 83 116 IPR017441 GO:0005524
Car07g00997 403 PANTHER RIBOSOMAL PROTEIN S6 KINASE 17 402 - -
Car07g00997 403 SMART pkinase_C_6 335 395 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car07g00997 403 ProSiteProfiles Protein kinase domain profile. 77 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00997 403 Gene3D Transferase(Phosphotransferase) domain 1 158 353 - -
Car07g00997 403 MobiDBLite consensus disorder prediction 1 28 - -
Car07g00997 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Car07g00997 403 SMART serkin_6 77 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00997 403 ProSiteProfiles AGC-kinase C-terminal domain profile. 335 403 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car07g00997 403 SUPERFAMILY Protein kinase-like (PK-like) 75 386 IPR011009 -
Car07g00997 403 Pfam Protein kinase C terminal domain 356 393 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00997 Car-Chr7 8831037 8833835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00997 28 396 AGC Kinase Gene Family AT3G08720 61.404 1.11e-176 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Car07g00997 Pkinase 6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00997 K04688 - gmx:100798259 648.277