Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car07g00996 | ATGGCGTTGAAAAGCATGTGCAAGCATTGGTTGTGTCTGCCAAAGTCACACGTTGGTGAAGATGTAACTCCAATTGAACCTTTTCAACAGGGACAGTGGGCAAGTCTACCACCTGAATTGCTTTTGGACATAATCCAAAGGGTTGAAAAGAGTGAGACATCTTGGCCTGCACGTACTGCTGTTGTTTCTTGTGCTTCAGTATGTAAATCATGGAGGGCCATCACCAAAGAGATCATCAAGACTCCTCAACAATGTGGAAAGATTACGTTTCCTATTTCATTAAAGCAGCCTGCTCCCCGTGATTATCAAATACCATGCTTTATTAAGACGAAGAGAGAAACTTCTACATTCCTGTTGTACTTAGGTTTGGTGCCAACGAGGAATCAACGATGTAAGTTGTTATTAGCCGCCAGAAAGACAAGAAGGGCCACAGGCACGGATATTGTCATATCCTTGGCTGCAGATGATTTTTCTCAATCCAGCAAGAATTATGTTGGTAAACTGACGTCTAACTTTTGGGAAAACAAGTTCACTATATATGATACTCATTCTCCATATGATACTGCAATTCAACCAAACTGTCAAGGTGCGAGATTTAACTCGAAGCAGGTTTCGCTAAGAGCTCAAGCATGTTGCTGTCTTATTAGCACCATTTTGTATGACCGGAATACTCGCACGACTAGGAGGCCAATAAGAATGTCCTGCTTCATGAGCTCAATACCCGGCTCAGCTATCGATAAAGATGGAACCGCCCCGACTCCAACATCTTTACCTCCGGCACTGAAAAGGAAAAGTCCAATGACAGACTCATACTCCAACAGTGTATCAGAGCTACCAGGACTTAGTGAATGCTCTGTCACACCCTTGGTACTCTTAAGCAGACCTCACAAATGGTGTCAGCCGCAGCAGTGTTGGGCCAATGACCGTATTACGGTGAATTCAGTAAATAACTTTCAACTTGTAGCTAGTATGGATTTATCTCGTAATGTTTTCCCTGAAGAGAAAGATAGGGTAATCTTGCAGTTTGGAATGATTTCAACCAATACATTCATCATGGACTACTCTTATCCACTCTCTGCCTTCCAAGCCTTTGCCATCTGCTTGTCAAGCTTTGTTGCTAAACCAATCCGTTAA | 1134 | 0.4286 | MALKSMCKHWLCLPKSHVGEDVTPIEPFQQGQWASLPPELLLDIIQRVEKSETSWPARTAVVSCASVCKSWRAITKEIIKTPQQCGKITFPISLKQPAPRDYQIPCFIKTKRETSTFLLYLGLVPTRNQRCKLLLAARKTRRATGTDIVISLAADDFSQSSKNYVGKLTSNFWENKFTIYDTHSPYDTAIQPNCQGARFNSKQVSLRAQACCCLISTILYDRNTRTTRRPIRMSCFMSSIPGSAIDKDGTAPTPTSLPPALKRKSPMTDSYSNSVSELPGLSECSVTPLVLLSRPHKWCQPQQCWANDRITVNSVNNFQLVASMDLSRNVFPEEKDRVILQFGMISTNTFIMDYSYPLSAFQAFAICLSSFVAKPIR | 377 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car07g00996 | 377 | SUPERFAMILY | Tubby C-terminal domain-like | 82 | 374 | IPR025659 | - | |
Car07g00996 | 377 | Gene3D | - | 26 | 81 | - | - | |
Car07g00996 | 377 | Pfam | F-box domain | 33 | 78 | IPR001810 | GO:0005515 | |
Car07g00996 | 377 | PANTHER | TUBBY-LIKE F-BOX PROTEIN 5 ISOFORM X1 | 8 | 375 | - | - | |
Car07g00996 | 377 | Gene3D | Tubby Protein; Chain A | 91 | 377 | IPR025659 | - | |
Car07g00996 | 377 | PANTHER | TUBBY-RELATED | 8 | 375 | - | - | |
Car07g00996 | 377 | SUPERFAMILY | F-box domain | 28 | 77 | IPR036047 | GO:0005515 | |
Car07g00996 | 377 | Pfam | Tub family | 94 | 371 | IPR000007 | - | |
Car07g00996 | 377 | PRINTS | Tubby superfamily signature | 148 | 164 | IPR000007 | - | |
Car07g00996 | 377 | PRINTS | Tubby superfamily signature | 164 | 188 | IPR000007 | - | |
Car07g00996 | 377 | PRINTS | Tubby superfamily signature | 212 | 239 | IPR000007 | - | |
Car07g00996 | 377 | PRINTS | Tubby superfamily signature | 306 | 322 | IPR000007 | - | |
Car07g00996 | 377 | PRINTS | Tubby superfamily signature | 335 | 354 | IPR000007 | - | |
Car07g00996 | 377 | PRINTS | Tubby superfamily signature | 356 | 377 | IPR000007 | - | |
Car07g00996 | 377 | MobiDBLite | consensus disorder prediction | 246 | 268 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car07g00996 | Car-Chr7 | 8827226 | 8829978 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car07g00996 | 16 | 375 | TUB Transcription Factor Family | AT2G18280 | 51.752 | 4.23e-116 | 341 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TUB | Car07g00996 | Tub | 9.6e-70 | CL0395 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car07g00996 | K19600 | - | gmx:100777506 | 449.514 |