Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00993 ATGGAAGCTCCCCTCGTAAATGACTCCACTTTCTCTTCCACTAACCCTTCCTTGTCCGAGATTTGGCCCTTCCCTCTCCATCATTCTTATTATAATTCTCATTTCTCTCCCcaacaatacaacaacaacaacaacaacGAGTGTGGCAGTGGCACCACTAAGCATATAAAACTAGGATCCTCTGTCTCTGATGATAAAAAAGCAACTTCAATAGCAGCGCAGCAAGAGGAAAAACAAAATGCTAAACCATCTTGTGATGTGGCAGTGCCAGTGCCACCTAAGCAAGACTATATTCACGTTAGAGCCAGAAGAGGCCAAGCCACCGATAGCCACAGTCTTGCTGAGAGAGCAAGAAGAGAAAAGATTAGTGTGAGGATGAAAATTCTACAAGATTTAGTTCCGGGATGTAACAAGTTCCTTTCTATGAAGCTTGAAGCACTTAATTCCAGATTCAATATGCACCCTGCTATTGACTGTTTCCCTTCAAAAGAGGTTGGTGCTCAGCCATTTGACCTTTCTGGAATAATATTTGGACCACAAGCAGGCAGGGGCTATGCTCAAGGATCACAACCAGGATGGCTACATATGCAGATAGCTGGTGGTTTCAATAAATCAATGTAA 621 0.4155 MEAPLVNDSTFSSTNPSLSEIWPFPLHHSYYNSHFSPQQYNNNNNNECGSGTTKHIKLGSSVSDDKKATSIAAQQEEKQNAKPSCDVAVPVPPKQDYIHVRARRGQATDSHSLAERARREKISVRMKILQDLVPGCNKFLSMKLEALNSRFNMHPAIDCFPSKEVGAQPFDLSGIIFGPQAGRGYAQGSQPGWLHMQIAGGFNKSM 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00993 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 104 140 IPR036638 GO:0046983
Car07g00993 206 Gene3D - 96 150 IPR036638 GO:0046983
Car07g00993 206 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 106 157 IPR011598 GO:0046983
Car07g00993 206 MobiDBLite consensus disorder prediction 42 81 - -
Car07g00993 206 MobiDBLite consensus disorder prediction 42 88 - -
Car07g00993 206 PANTHER BNAC05G07950D PROTEIN 43 138 - -
Car07g00993 206 PANTHER BNAC05G07950D PROTEIN 139 204 - -
Car07g00993 206 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 43 138 IPR024097 GO:0006355
Car07g00993 206 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 139 204 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00993 Car-Chr7 8793400 8795690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00993 1 29 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 62.500 2.33e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00993 - - gmx:100799646 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00993 07 8793400 8795690 Car07g00993 07 8793400 8795690 ECH