Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00985 atGACCCTTAAGGGTGGCACAACACAAGCCTGTGCAGCATGCAAATTCCAAAGAAGAAAATGCACTCCTGAGTGCCTTTTAGCTCCATACTTCCCTGCAGACCAACCCAAAATATTCCTCAATGTCCATAAACTTTTTGGAGTTAGCAACATTGTGAAAATACTAAAACACCTTGAGCCTAGTCAGAAGAAAATTGCCATGGACTCTATTATCATTCAAGCTAATTATAGAGATAAGTATCCTGTGCATGGCTGTTGGGAAGAAATCTGCAGGCTACAATATCAAATATGGGTAGGGGAAGAAGAGCTTCATGCTGTTTATCAACAACTTGAAATTTGCAGGcagcaacaacaacaacaacaGTTGCCTCATGATGATGTGACTTCACAGTTAGAATTGGGTATGGCAGCCCCATGTTCCTCCAATGCACTCACACTCTTTAATCACactactacacaaccacagacttacaacaacaatacaGTGGCTGCTGCTCCTTTGTCTGTATCTCAGCAACATTCCTACTCCAACAGTAATAGTGTGGATTATAATAACTCACCTCTCTACATGGATTCAAAGGATAATAATGCAACAAATCCTAATTTGTGGATTCAGTGCCCTTACACAAATAACAATAGCAATTCAATAATAATGCAACCTCATCAGTTGGTTGCTTCAGAGTCACAACCGCTATCATCTGTCCAACAAGGAGTTGTTGAAGATAATTATGATGAGATGCATTCGTTTTTTGATACAGTTGATGATAGGCAATCATACATTTACTCTAAGGAGGCTTATGAATCAAGTTCGGAAGAATCACTGAAAGATACAAGAAAGTGCACAGAGCATGTTTCTGAGAATGAACTGAAGAGTGCTGCTGCTTGTTTCAGCCTTACCAGTGTCAACTGA 909 0.3751 MTLKGGTTQACAACKFQRRKCTPECLLAPYFPADQPKIFLNVHKLFGVSNIVKILKHLEPSQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWVGEEELHAVYQQLEICRQQQQQQQLPHDDVTSQLELGMAAPCSSNALTLFNHTTTQPQTYNNNTVAAAPLSVSQQHSYSNSNSVDYNNSPLYMDSKDNNATNPNLWIQCPYTNNNSNSIIMQPHQLVASESQPLSSVQQGVVEDNYDEMHSFFDTVDDRQSYIYSKEAYESSSEESLKDTRKCTEHVSENELKSAAACFSLTSVN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00985 302 Pfam Lateral organ boundaries (LOB) domain 10 105 IPR004883 -
Car07g00985 302 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Car07g00985 302 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 278 - -
Car07g00985 302 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00985 Car-Chr7 8704791 8709125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00985 1 265 AS2 family AT3G47870 40.968 1.02e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car07g00985 LOB 1.1e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00985 07 8704791 8709125 Car07g00985 07 8704791 8709125 ECH